RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 RHOCP08134 193 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 CTPS1P17812 591 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 ENGP17813 658 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 AQP1P29972 269 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 TTPAP49638 278 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 CLCN7P51798 805 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 CDH4P55283 916 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 TWF1Q12792 350 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 GPR19Q15760 415 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.94■□□□□ 0.46
SCARF1-202ENST00000348987 PTOV1Q86YD1 416 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 TMC8Q8IU68 726 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 SLC43A3Q8NBI5 491 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 OPALINQ96PE5 141 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 HHATLQ9HCP6 504 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 POLHQ9Y253 713 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 PCDHGB3Q9Y5G1 929 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 ALG5Q9Y673 324 aa17.94■□□□□ 0.46
SCARF1-202ENST00000348987 SLC35F4A4IF30 521 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 COCHO43405 550 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 TSPAN9O75954 239 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 ZNF30P17039 623 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 GPC1P35052 558 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 RNF219Q5W0B1 726 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 FUT10Q6P4F1 479 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 TRIM46Q7Z4K8 759 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 RNF180Q86T96 592 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CLDN19Q8N6F1 224 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 PCSK9Q8NBP7 692 aaKnown RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 DENND6BQ8NEG7 585 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 OR6K2Q8NGY2 324 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 LRRC20Q8TCA0 184 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CD99L2Q8TCZ2 262 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 BCL7CQ8WUZ0 217 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 KCNJ9Q92806 393 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 WDFY2Q96P53 400 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 BOCQ9BWV1 1114 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 NIPAL2Q9H841 368 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 GLTPQ9NZD2 209 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 PCDHB9Q9Y5E1 797 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 DNMT3AQ9Y6K1 912 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 TRAV19A0A0A6YYK7 116 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 FADS2P1A8MWK0 482 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 WWP2O00308 870 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CYP17A1P05093 508 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 ALPIP09923 528 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CPN2P22792 545 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 WEE1P30291 646 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CORO1AP31146 461 aaKnown RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CLDN8P56748 225 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 TAGLNQ01995 201 aaKnown RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 FOXD4Q12950 439 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 TCTN1Q2MV58 587 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 TIGD3Q6B0B8 471 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 PLET1Q6UQ28 207 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCARF1-202ENST00000348987 DBF4BQ8NFT6 615 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 DIRAS2Q96HU8 199 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CDCA4Q9BXL8 241 aa17.93■□□□□ 0.46
SCARF1-202ENST00000348987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■■□□□ 11.9
SCARF1-202ENST00000348987 SNTNA6NMZ2 147 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 LOC730098B7Z3J9 87 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 TNFRSF11BO00300 401 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 POU2F1P14859 743 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 SLC11A2P49281 568 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 KCNJ10P78508 379 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 HSPA14Q0VDF9 509 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 PPIGQ13427 754 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCARF1-202ENST00000348987 ATXN7L2Q5T6C5 722 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-202ENST00000348987 DTX3Q8N9I9 347 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 C9orf43Q8TAL5 461 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-202ENST00000348987 EGFL8Q99944 293 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 NUP50Q9UKX7 468 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 MANBAO00462 879 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 OR7A10O76100 309 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 CKMT1AP12532 417 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 CTRB1P17538 263 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 TNFRSF1BP20333 461 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 CSTF2P33240 577 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCARF1-202ENST00000348987 PYDC2Q56P42 97 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 CTRB2Q6GPI1 263 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 CXorf57Q6NSI4 855 aaKnown RBP17.92■□□□□ 0.46
SCARF1-202ENST00000348987 XKRXQ6PP77 449 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 ZNF621Q6ZSS3 439 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 OR10G2Q8NGC3 310 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 OR8H1Q8NGG4 311 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 LKAAEAR1Q8TD35 194 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 ACAT2Q9BWD1 397 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 APOL5Q9BWW9 433 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 MIXL1Q9H2W2 232 aa17.92■□□□□ 0.46
SCARF1-202ENST00000348987 RABL2AQ9UBK7 228 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-202ENST00000348987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-202ENST00000348987 TEX51A0A1B0GUA7 166 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 OR5K3A6NET4 321 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 STC2O76061 302 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 PDGFAP04085 211 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 GSTM1P09488 218 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 PSMA3P25788 255 aa17.91■□□□□ 0.46
SCARF1-202ENST00000348987 SLC9A3P48764 834 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms