RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 BBS7Q8IWZ6 715 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 TIGD4Q8IY51 512 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 SLC34A3Q8N130 599 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 NANOGP1Q8N7R0 232 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 OR6M1Q8NGM8 313 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 YIPF5Q969M3 257 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 SLC19A3Q9BZV2 496 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 GHITMQ9H3K2 345 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 MYOZ2Q9NPC6 264 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 EXOSC4Q9NPD3 245 aaKnown RBP8.08□□□□□ -1.12
SKA2-201ENST00000330137 RAD18Q9NS91 495 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 RBM22Q9NW64 420 aaKnown RBP eCLIP8.08□□□□□ -1.12
SKA2-201ENST00000330137 CD274Q9NZQ7 290 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 GALPQ9UBC7 116 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 NLKQ9UBE8 527 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 FAM8A1Q9UBU6 413 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 NPTNQ9Y639 398 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 CACNG2Q9Y698 323 aa8.08□□□□□ -1.12
SKA2-201ENST00000330137 PDCD11Q14690 1871 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 MOXD2PA6NHM9 499 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 TSC22D2O75157 780 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 APOL3O95236 402 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PROS1P07225 676 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PPIBP23284 216 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 PRPH2P23942 346 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 MMP12P39900 470 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 CHRNA4P43681 627 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 INPP1P49441 399 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 EVX1P49640 407 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 MAN2A2P49641 1150 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 DAOAP59103 153 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PITX1P78337 314 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 DHODHQ02127 395 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 NRG1Q02297 640 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 ADAM15Q13444 863 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 NHLRC3Q5JS37 347 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 LIPIQ6XZB0 460 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 GPR155Q7Z3F1 870 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 FGD2Q7Z6J4 655 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 GPSM1Q86YR5 675 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 DCBLD1Q8N8Z6 715 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 TMEM145Q8NBT3 493 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 CAMKVQ8NCB2 501 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 ATP6V1C2Q8NEY4 427 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 ACOT12Q8WYK0 555 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 HSH2DQ96JZ2 352 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 KCNC2Q96PR1 638 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 GLIS2Q9BZE0 524 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 CATSPERZQ9NTU4 200 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 TXNL4BQ9NX01 149 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 SDHAF2Q9NX18 166 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 COPS3Q9UNS2 423 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 GSTK1Q9Y2Q3 226 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 IRGMA1A4Y4 181 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 HAS3O00219 553 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 SMAD6O43541 496 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 LDB2O43679 373 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PRKYO43930 277 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PRMT3O60678 531 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 CDRT1O95170 752 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 IGHA2P01877 340 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 S100A3P33764 101 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 STK19P49842 368 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 HMGA2P52926 109 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 ACLYP53396 1101 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 FOXD4Q12950 439 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 RPA4Q13156 261 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PPIGQ13427 754 aaKnown RBP eCLIP8.07□□□□□ -1.12
SKA2-201ENST00000330137 USP39Q53GS9 565 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 PLA1AQ53H76 456 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 CFAP77Q6ZQR2 320 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 CDH26Q8IXH8 852 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 LIX1Q8N485 282 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 FAM46DQ8NEK8 389 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 OR4C15Q8NGM1 316 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 OR2T4Q8NH00 348 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.07□□□□□ -1.122e-11■■■■■ 38.9
SKA2-201ENST00000330137 MTERF3Q96E29 417 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 TRIB3Q96RU7 358 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 FN3KQ9H479 309 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 MARCH4Q9P2E8 410 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 ZNF70Q9UC06 446 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 ABT1Q9ULW3 272 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 CRYL1Q9Y2S2 319 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 RPL36Q9Y3U8 105 aaKnown RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 NUBP2Q9Y5Y2 271 aa8.07□□□□□ -1.12
SKA2-201ENST00000330137 COL11A1P12107 1806 aaPredicted RBP8.07□□□□□ -1.12
SKA2-201ENST00000330137 MEIKINA0A087WXM9 373 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 LINC00854A0A1B0GVQ3 168 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 ZAR1LA6NP61 321 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 F8W036 122 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 TNFRSF11BO00300 401 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 HBP1O60381 514 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 PLOD3O60568 738 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 ITGA10O75578 1167 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 OR5F1O95221 314 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 UGT2B7P16662 529 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 HLA-DPA1P20036 260 aa8.06□□□□□ -1.12
SKA2-201ENST00000330137 UBA1P22314 1058 aaKnown RBP8.06□□□□□ -1.12
SKA2-201ENST00000330137 GALP22466 123 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms