RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 RPS6P62753 249 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 MBTD1Q05BQ5 628 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ZBTB17Q13105 803 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 GIT2Q14161 759 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SF3B4Q15427 424 aaKnown RBP eCLIP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 UGCGQ16739 394 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CCDC40Q4G0X9 1142 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SPDYCQ5MJ68 293 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ARHGEF16Q5VV41 709 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 PRSS55Q6UWB4 352 aaPredicted RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 KCTD9Q7L273 389 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 MIER3Q7Z3K6 550 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF843Q8N446 348 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CPSF7Q8N684 471 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ERGIC2Q96RQ1 377 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CACNG4Q9UBN1 327 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 DLGAP4Q9Y2H0 992 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 PPP2R2CQ9Y2T4 447 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 UBIAD1Q9Y5Z9 338 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 LRRD1A4D1F6 860 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ANKRD66B4E2M5 251 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 DDX39AO00148 427 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SLC33A1O00400 549 aaPredicted RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 RTCAO00442 366 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 PDXKO00764 312 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 GAPDHSO14556 408 aaPredicted RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 DVL1O14640 695 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 STAM2O75886 525 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 PLGP00747 810 aaPredicted RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 GYPCP04921 128 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 HOXC6P09630 235 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ANKRD34CP0C6C1 535 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CSF2RAP15509 400 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ITIH1P19827 911 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SFNP31947 248 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 FUT6P51993 359 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 HMGCS2P54868 508 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 DLK1P80370 383 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 DSC1Q08554 894 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 KNOP1Q1ED39 458 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 HFEQ30201 348 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 IQCCQ4KMZ1 466 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SNRNP48Q6IEG0 339 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 NRARPQ7Z6K4 114 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 TMEM139Q8IV31 216 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 MMD2Q8IY49 270 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 THOC1Q96FV9 657 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 PDLIM5Q96HC4 596 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 CCDC43Q96MW1 224 aaKnown RBP3.76□□□□□ -1.81
SMCO3-201ENST00000316048 TAAR1Q96RJ0 339 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 SLC29A3Q9BZD2 475 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 ODF2LQ9ULJ1 636 aa3.76□□□□□ -1.81
SMCO3-201ENST00000316048 PHLPP2Q6ZVD8 1323 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 A0A0G2JNG1 304 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 TTC26A0AVF1 554 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 ARHGEF35A5YM69 484 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 MAGEA13PA6NCF6 341 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CD8B2A6NJW9 211 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 C4orf47A7E2U8 309 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 E9PI62 339 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CTDSPLO15194 276 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 KIF5CO60282 957 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 BAG2O95816 211 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 H1F0P07305 194 aaKnown RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PRSS2P07478 247 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 FAM200BP0CF97 657 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 THEGLP0DJG4 465 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 UROSP10746 265 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 HSPA8P11142 646 aaKnown RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PSMA3P25788 255 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CCND2P30279 289 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CASQ1P31415 396 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CYLC1P35663 651 aaPredicted RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 AHRP35869 848 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 QARSP47897 775 aaKnown RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 ZNF81P51508 661 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PGGT1BP53609 377 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 ST8SIA6P61647 398 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 GNG11P61952 73 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CX3CL1P78423 397 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 KIR2DS5Q14953 304 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 SYCP1Q15431 976 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 ZCWPW2Q504Y3 356 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CORO6Q6QEF8 472 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 BTNL8Q6UX41 500 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 SYT10Q6XYQ8 523 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 C1orf186Q6ZWK4 172 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 OTUD6AQ7L8S5 288 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 MTERF4Q7Z6M4 381 aaKnown RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 PIGWQ7Z7B1 504 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 SFR1Q86XK3 245 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 NELFCDQ8IXH7 590 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 RDM1Q8NG50 284 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 NEK11Q8NG66 645 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 LILRB1Q8NHL6 650 aaPredicted RBP3.75□□□□□ -1.81
SMCO3-201ENST00000316048 SCFD1Q8WVM8 642 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 EEF2KMTQ96G04 330 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CDHR1Q96JP9 859 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 CCDC3Q9BQI4 270 aa3.75□□□□□ -1.81
SMCO3-201ENST00000316048 TIPINQ9BVW5 301 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms