RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 MTAPQ13126 283 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 RPA4Q13156 261 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 C9orf64Q5T6V5 341 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 MED27Q6P2C8 311 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 B3GNT7Q8NFL0 401 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 GATAD2BQ8WXI9 593 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 CCDC120Q96HB5 630 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 PSKH2Q96QS6 385 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 DOHHQ9BU89 302 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 TTTY10Q9BZA0 68 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 ZNF282Q9UDV7 671 aaPredicted RBP11.71□□□□□ -0.54
PDGFD-201ENST00000302251 MUSKO15146 869 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 CAV3P56539 151 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 CLDN8P56748 225 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 RPS13P62277 151 aaKnown RBP11.71□□□□□ -0.54
PDGFD-201ENST00000302251 DPY19L1Q2PZI1 675 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 OTUD1Q5VV17 481 aaPredicted RBP11.71□□□□□ -0.54
PDGFD-201ENST00000302251 CAPN13Q6MZZ7 669 aaPredicted RBP11.71□□□□□ -0.54
PDGFD-201ENST00000302251 TMEM179BQ7Z7N9 219 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 IQCF1Q8N6M8 205 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 OR10H4Q8NGA5 316 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 TSSK6Q9BXA6 273 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 GORASP2Q9H8Y8 452 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 ANKHQ9HCJ1 492 aa11.71□□□□□ -0.54
PDGFD-201ENST00000302251 RGS17Q9UGC6 210 aaPredicted RBP11.71□□□□□ -0.54
PDGFD-201ENST00000302251 A0A1W2PPK0 400 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 MID1O15344 667 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 KHDRBS3O75525 346 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 KDM4BO94953 1096 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 GJB5O95377 273 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PTHP01270 115 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 RETP07949 1114 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 ALPPL2P10696 532 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 RYKP34925 604 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PREPP48147 710 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 TAS2R50P59544 299 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 FGFBP1Q14512 234 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 KCNA10Q16322 511 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 UPP1Q16831 310 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 SUSD1Q6UWL2 747 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 NOXA1Q86UR1 476 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DNAJB8Q8NHS0 232 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 FYTTD1Q96QD9 318 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 SARDHQ9UL12 918 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 CENPBD1B2RD01 187 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 FZD9O00144 591 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 E2F3O00716 465 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PLD2O14939 933 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 SCAMP1O15126 338 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 CDKN2CP42773 168 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 MAP2K3P46734 347 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 LYPLAL1Q5VWZ2 237 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 RAET1GQ6H3X3 334 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DHRS4L2Q6PKH6 230 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 ARL9Q6T311 187 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 RNF180Q86T96 592 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 FAM46DQ8NEK8 389 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 SCAMP4Q969E2 229 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 TMEM80Q96HE8 168 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 TSPAN18Q96SJ8 248 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 WRAP53Q9BUR4 548 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 IQCMA0A1B0GVH7 501 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 A0A1B0GW55 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PDPK1O15530 556 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 KLHL18O94889 574 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 CPNE6O95741 557 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4L2P0CJ85 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4L3P0CJ86 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4L4P0CJ87 422 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4L5P0CJ88 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4L6P0CJ89 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4L7P0CJ90 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PGFP49763 221 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 ELAVL2Q12926 359 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 LRRC26Q2I0M4 334 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 OR5H6Q8NGV6 325 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 ARRDC2Q8TBH0 407 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 ADAMTS16Q8TE57 1224 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 GEMIN6Q8WXD5 167 aaKnown RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 GGHQ92820 318 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 UROC1Q96N76 676 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DPCDQ9BVM2 203 aaPredicted RBP11.7□□□□□ -0.54
PDGFD-201ENST00000302251 RACGAP1Q9H0H5 632 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 DUX4Q9UBX2 424 aa11.7□□□□□ -0.54
PDGFD-201ENST00000302251 PCDHGA12O60330 932 aa11.69□□□□□ -0.54
PDGFD-201ENST00000302251 URODP06132 367 aa11.69□□□□□ -0.54
PDGFD-201ENST00000302251 JUNBP17275 347 aaPredicted RBP11.69□□□□□ -0.54
PDGFD-201ENST00000302251 SLC9A3P48764 834 aa11.69□□□□□ -0.54
PDGFD-201ENST00000302251 ZNF697Q5TEC3 545 aa11.69□□□□□ -0.54
PDGFD-201ENST00000302251 PTRH1Q86Y79 214 aaKnown RBP11.69□□□□□ -0.54
PDGFD-201ENST00000302251 ZNF366Q8N895 744 aa11.69□□□□□ -0.54
PDGFD-201ENST00000302251 NT5C3BQ969T7 300 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms