RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 TMEM220Q6QAJ8 160 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 FANK1Q8TC84 345 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 PLEKHO2Q8TD55 490 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 INPP4AQ96PE3 977 aaPredicted RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 IL12RB2Q99665 862 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 RPS10P5Q9NQ39 176 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 TIGARQ9NQ88 270 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 C19orf25Q9UFG5 118 aaPredicted RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 ICKQ9UPZ9 632 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 EPHX1P07099 455 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 S1PR1P21453 382 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 CHATP28329 748 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 AFF3P51826 1226 aaKnown RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 RAB31Q13636 194 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 EIF2B1Q14232 305 aaKnown RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 RAB41Q5JT25 222 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 C10orf62Q5T681 223 aaPredicted RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 PXKQ7Z7A4 578 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 SLC25A36Q96CQ1 311 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 OR4F21O95013 312 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 SLC6A6P31641 620 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 MAP2K3P46734 347 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 GNPDA2Q8TDQ7 276 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 TDP1Q9NUW8 608 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 PCDHGA2Q9Y5H1 932 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 DNAJC13O75165 2243 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 HMX3A6NHT5 357 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 PROM1O43490 865 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 GP1BBP13224 206 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 CSNK2A2P19784 350 aaPredicted RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 TCEA1P23193 301 aaKnown RBP11.73□□□□□ -0.53
SRRM4-201ENST00000267260 CDH11P55287 796 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 ANKS1BQ7Z6G8 1248 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 PSD4Q8NDX1 1056 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 BIRC8Q96P09 236 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 OR2S2Q9NQN1 319 aa11.73□□□□□ -0.53
SRRM4-201ENST00000267260 RGS9O75916 674 aaPredicted RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CSF2P04141 144 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 ACSBG2Q5FVE4 666 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PDE12Q6L8Q7 609 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CEACAM20Q6UY09 585 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 FUNDC2Q9BWH2 189 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 MTFR1LQ9H019 292 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 ATG5Q9H1Y0 275 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 GABRDO14764 452 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 HCRTR2O43614 444 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 STBD1O95210 358 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 IL33O95760 270 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CHRNB2P17787 502 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 NMBRP28336 390 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 ACTR1BP42025 376 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 GLUD2P49448 558 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PLEKHG7Q6ZR37 379 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PLA2G15Q8NCC3 412 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 LCKP06239 509 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 ENGP17813 658 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 DGKGP49619 791 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SLC18A1P54219 525 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CNTN2Q02246 1040 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PAPD4Q6PIY7 484 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 GPR149Q86SP6 731 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 OR4K3Q96R72 315 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SLC32A1Q9H598 525 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PRRC2BQ5JSZ5 2229 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 IQCF5A8MTL0 148 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SPATA31C2B4DYI2 1134 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SHOXO15266 292 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 IMPDH1P20839 514 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 RRAS2P62070 204 aaPredicted RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PIGGQ5H8A4 983 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 UGT2A3Q6UWM9 527 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 LRRC55Q6ZSA7 311 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 OTOP3Q7RTS5 596 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CARM1Q86X55 608 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 NPLQ9BXD5 320 aaPredicted RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 POLMQ9NP87 494 aaPredicted RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 QPCTLQ9NXS2 382 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 DIP2CQ9Y2E4 1556 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 NDUFS4O43181 175 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 IRAK2O43187 625 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 MAOAP21397 527 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 S100A7P31151 101 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PLA2G16P53816 162 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 ELOAQ14241 798 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CCDC32Q9BV29 185 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PPP4R1LQ9P1A2 415 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 EEF1E1O43324 174 aaKnown RBP11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CLN5O75503 358 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CLEC3AO75596 197 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 RHOP08100 348 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 CD3GP09693 182 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 LAG3P18627 525 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SOX9P48436 509 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 TAF10Q12962 218 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 SLC22A10Q63ZE4 541 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 VSIG10LQ86VR7 867 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 PYROXD2Q8N2H3 581 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 FAM156AQ8NDB6 213 aa11.72□□□□□ -0.53
SRRM4-201ENST00000267260 EFCAB11Q9BUY7 163 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms