RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Gm4775F7ANJ3 135 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn2r102L7N279 857 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dll3O88516 592 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dnajb5O89114 348 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 GhrP16882 650 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 RcvrnP34057 202 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 CcnfP51944 777 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ube2e3P52483 207 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rack1P68040 317 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Akr1c6P70694 323 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dusp5Q1HL35 384 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 HexdcQ3U4H6 486 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cpxcr1Q3V0P1 322 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 MybphlQ5FW53 355 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 CishQ62225 257 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 A4galtQ67BJ4 359 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sohlh1Q6IUP1 357 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr871Q7TRF0 311 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Creg2Q8BGC9 288 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mospd3Q8BGG6 235 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Kyat1Q8BTY1 424 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ly6g6eQ8K1T6 166 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 DolkQ8R2Y3 534 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ing3Q8VEK6 421 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr183Q8VFB9 309 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Mrgprb5Q91ZB9 322 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Prpf19Q99KP6 504 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cstf1Q99LC2 431 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gkn2Q9CQS6 184 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Prps2Q9CS42 318 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cmpk1Q9DBP5 196 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Fads3Q9JJE7 449 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Akap8lQ9R0L7 642 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Dlc1Q9R0Z9 1092 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ak4Q9WUR9 223 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 AgtrapQ9WVK0 161 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Snrnp200Q6P4T2 2136 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zscan4eA0A1B0GRE8 505 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cytl1A1E5L0 139 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm17067E9Q6S4 354 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm20403G3UYB0 123 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gm43302L7N1X8 611 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Angpt1O08538 498 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 H2-Q1O19441 368 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Rem1O35929 297 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 EnamO55196 1274 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hcn4O70507 1186 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 P01654 111 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 P01656 111 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 P03977 111 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 AprtP08030 180 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cd3gP11942 182 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfp60P16374 707 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tia1P52912 386 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Il12rb2P97378 874 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gbp10Q000W5 611 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vwa5b2Q3UR50 1248 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Timm8a2Q4FZG7 97 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Slc23a3Q60850 611 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ift52Q62559 426 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tvp23aQ6NVH0 222 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tmem121Q80XA0 318 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Zfand1Q8BFR6 268 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 UnkQ8BL48 810 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Arel1Q8CHG5 823 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Osgin1Q8VC10 478 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Olfr77Q8VEY9 312 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Chil4Q91Z98 402 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 EedQ921E6 441 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Actr3Q99JY9 418 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cops7aQ9CZ04 275 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ndufaf4Q9D1H6 173 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 AtmQ62388 3066 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Gbp6A0A0G2JDV3 611 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 4932443I19RikA0A286YE38 169 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn2r120E9PX34 856 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 ChadlE9Q7T7 748 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn2r61L7N2B8 865 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cdh16O88338 830 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cntn1P12960 1020 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 AbatP61922 500 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tfb2mQ3TL26 396 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Itga2Q62469 1178 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Sdc3Q64519 442 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Foxl1Q64731 336 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Cyp2r1Q6VVW9 501 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Poglut1Q8BYB9 392 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Bpifb2Q8C1E1 462 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Spin4Q8K1L2 249 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Polr1eQ8K202 482 aaKnown RBP8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 2310003L06RikQ9CV82 495 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Upk1aQ9D132 257 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Hm13Q9D8V0 378 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 IcmtQ9EQK7 283 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Clca3a2Q9EQR4 902 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Tcea2Q9QVN7 299 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ap4s1Q9WVL1 144 aa8.33□□□□□ -1.08
Trim39-201ENSMUST00000042717 Ascc3E9PZJ8 2198 aaKnown RBP8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 BC034090A0A087WP46 1202 aa8.32□□□□□ -1.08
Trim39-201ENSMUST00000042717 Vmn1r86L7N213 316 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 46.3 ms