RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Ncam1P13595 1115 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Scn1bP97952 218 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Cdh12Q5RJH3 794 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Ephx4Q6IE26 359 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Cdh24Q6PFX6 781 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Thnsl2Q80W22 483 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Fam131aQ8BWU3 361 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Rnf144aQ925F3 292 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Psg23Q9D2U0 471 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Cldn34b2Q9D9N2 209 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Psg21Q9DAV5 471 aa15.83■□□□□ 0.13
Shh-201ENSMUST00000002708 Chd3B1AR17 2055 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Igkv18-36A0A075B5M9 114 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Zfp973A2BE20 318 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Tex16F6WNY1 1150 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm17093F6XGJ4 214 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Vmn2r6H3BK29 913 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Fmo6J3QMN6 532 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm3488M0QW81 238 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Gsta2P10648 222 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Wnt3P17553 355 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Chrm4P32211 479 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Rab12P35283 243 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 VegfbP49766 207 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Kcnj12P52187 427 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Nanos3P60324 178 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Smu1Q3UKJ7 513 aaKnown RBP15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Taar7eQ5QD09 358 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Hamp2Q80T19 83 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 CpmQ80V42 443 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Rmnd5aQ80YQ8 391 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Reep1Q8BGH4 201 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Ankrd9Q8BH83 326 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Lrrtm3Q8BZ81 582 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 C1rbQ8CFG9 706 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Olfr659Q8VGV6 322 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Gbgt1Q8VI38 347 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Q9D112 206 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Slc19a2Q9EQN9 498 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Tp73Q9JJP2 631 aa15.83■□□□□ 0.12
Shh-201ENSMUST00000002708 Sult2a7A0A1B0GRF0 313 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Zfp600A2A7V0 737 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Smim18J3QNP2 93 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Olfr319L7MTY4 306 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Kcnj1O88335 372 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Cst3P21460 140 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 CremP27699 357 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Erp29P57759 262 aaKnown RBP15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Inpp5jP59644 1003 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Cdk18Q04899 451 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Slc10a7Q5PT53 340 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Abcg1Q64343 666 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Timm29Q8BGX2 266 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Fam155aQ8CCS2 467 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Vmn1r234Q8R298 329 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 NgrnQ99KS2 293 aaKnown RBP15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Sesn3Q9CYP7 492 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Cep97Q9CZ62 856 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Serpinb1aQ9D154 379 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 NtsQ9D3P9 169 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Vnn3Q9QZ25 500 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 ItgamP05555 1153 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Atp1b2P14231 290 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Klkb1P26262 638 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Secisbp2Q3U1C4 858 aaKnown RBP15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Larp4bQ6A0A2 741 aaKnown RBP15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Ces5aQ6AW46 575 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Olfr1152Q7TR34 310 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Znf689Q8BKK5 500 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 BtdQ8CIF4 520 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Slc8a2Q8K596 921 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Olfr1469Q8VFW5 309 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Pcdhgb2Q91XX7 928 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 HadhbQ99JY0 475 aaKnown RBP15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Ms4a10Q99N03 267 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Klhl28Q9CR40 571 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Hyal6Q9D4E9 494 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Gtf2e2Q9D902 292 aa15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Ndufs3Q9DCT2 263 aaKnown RBP15.82■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm7682A0A0J9YUM1 481 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Gm10639E9Q6L7 222 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 2610001J05RikF2Z3Y9 59 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 TspearJ3S6Y1 670 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 HgdO09173 445 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Tssk2O54863 358 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Tnfaip1O70479 316 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Dnajb5O89114 348 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Ctla2aP12399 137 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Syndig1lQ3USQ7 237 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 H2-Q2Q4KN81 360 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Ggt1Q60928 568 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Amer3Q6NS69 780 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Bfsp2Q6NVD9 416 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Mfsd13aQ6PDE8 519 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Znf503Q7TMA2 652 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Plekha8Q80W71 519 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Scn3bQ8BHK2 215 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Dleu7Q8CHZ8 209 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Gabarapl1Q8R3R8 117 aa15.81■□□□□ 0.12
Shh-201ENSMUST00000002708 Gtf2a1lQ8R4I4 468 aa15.81■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 66.8 ms