RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 CHRFAM7AQ494W8 412 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 OR51I1Q9H343 314 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 SRA1Q9HD15 236 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 COL1A2P08123 1366 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 AP2A1O95782 977 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 GLP1RP43220 463 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 SQSTM1Q13501 440 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 DEFB133Q30KQ1 61 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 GPR157Q5UAW9 335 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 NXF5Q9H1B4 397 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 MED16Q9Y2X0 877 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 MAFBQ9Y5Q3 323 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 RAB27BO00194 218 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 CSF2RAP15509 400 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 ELOCQ15369 112 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 LRFN4Q6PJG9 635 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 ZC3H14Q6PJT7 736 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 GATAD2BQ8WXI9 593 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 TFGQ92734 400 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 RIT1Q92963 219 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 DNTTIP1Q9H147 329 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 TMEM233B4DJY2 109 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 FKBP1AP62942 108 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 TNFAIP8L3Q5GJ75 292 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 FAM76BQ5HYJ3 339 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 DNM1P34Q6PK57 102 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 TIGD4Q8IY51 512 aa17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 AKAP1Q92667 903 aaKnown RBP eCLIP17.28■□□□□ 0.36
CACNA1A-227ENST00000636549 AHSA1O95433 338 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 H2BFMP0C1H6 154 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 STRADAQ7RTN6 431 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 DIO2Q92813 273 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 LENG8Q96PV6 779 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 SLC25A51Q9H1U9 297 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 COL20A1Q9P218 1284 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 TNFRSF10DQ9UBN6 386 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 MAN2B2Q9Y2E5 1009 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 COQ9O75208 318 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 EFR3AQ14156 821 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 FXNQ16595 210 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 SLX4IPQ5VYV7 408 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF572Q7Z3I7 529 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 ZNF282Q9UDV7 671 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 KCTD3Q9Y597 815 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 PTPRUQ92729 1446 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 RFPL2O75678 378 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 IDH3AP50213 366 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 TSTQ16762 297 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 MYLK3Q32MK0 819 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 TMEM107Q6UX40 140 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 OXSMQ9NWU1 459 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 CAMK2AQ9UQM7 478 aa17.27■□□□□ 0.36
CACNA1A-227ENST00000636549 TLR4O00206 839 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 BMP8BP34820 402 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 RPS3AP61247 264 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 AAK1Q2M2I8 961 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 CFAP77Q6ZQR2 320 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 KAT8Q9H7Z6 458 aaKnown RBP17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF358Q9NW07 568 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 ASB6Q9NWX5 421 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 NWD1Q149M9 1564 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 GDF10P55107 478 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 C9orf152Q5JTZ5 239 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 RNF130Q86XS8 419 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 PGAM5Q96HS1 289 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 KCNA7Q96RP8 456 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 WACQ9BTA9 647 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 PLEKHA3Q9HB20 300 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 PDE7BQ9NP56 450 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 KCMF1Q9P0J7 381 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 PCDHGA11Q9Y5H2 935 aa17.27■□□□□ 0.35
CACNA1A-227ENST00000636549 ENSAO43768 121 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 FARS2O95363 451 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF84P51523 738 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ERN2Q76MJ5 926 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ZER1Q7Z7L7 766 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 AENQ8WTP8 325 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 FKRPQ9H9S5 495 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 RNF11Q9Y3C5 154 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 RNGTTO60942 597 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 SASH3O75995 380 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 EOMESO95936 686 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ETV3P41162 512 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 RORCP51449 518 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 NDST2P52849 883 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 CPEB1Q9BZB8 566 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ZNF180Q9UJW8 692 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 DERAQ9Y315 318 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 CRHR1P34998 444 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 GALNT1Q10472 559 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 HM13Q8TCT9 377 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 TFAP2BQ92481 460 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ZDHHC12Q96GR4 267 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 PITX2Q99697 317 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 PLLPQ9Y342 182 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 IGLON5A6NGN9 336 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 ARGFXA6NJG6 315 aa17.26■□□□□ 0.35
CACNA1A-227ENST00000636549 CA12O43570 354 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms