RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IGFBPL1Q8WX77 278 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 METTL21AQ8WXB1 218 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 PHYHIPQ92561 330 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 SEPT8Q92599 483 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 RAB39BQ96DA2 213 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 MTBPQ96DY7 904 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 NDNQ99608 321 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 MAP3K3Q99759 626 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 NEURL2Q9BR09 285 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CBWD1Q9BRT8 395 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 UBAC1Q9BSL1 405 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 TRAF4Q9BUZ4 470 aaPredicted RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 MRPL13Q9BYD1 178 aaKnown RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 CRNKL1Q9BZJ0 848 aaKnown RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 PKIBQ9C010 78 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 GANQ9H2C0 597 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 DPEP2Q9H4A9 486 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 TRNAU1APQ9NX07 287 aaKnown RBP3.52□□□□□ -1.85
TDP1-217ENST00000557782 SMPD4Q9NXE4 827 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 PTTG2Q9NZH5 202 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 PCSK1NQ9UHG2 260 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 CLEC4AQ9UMR7 237 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 NCKAP1Q9Y2A7 1128 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 HS3ST3A1Q9Y663 406 aa3.52□□□□□ -1.85
TDP1-217ENST00000557782 ARPC4-TTLL3A0A0A6YYG9 625 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 LINC01548A6NM66 108 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 H0YIV9 168 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 BOLA2-SMG1P6H3BVE0 249 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 L7N2F9 121 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 PES1O00541 588 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 ZNHIT1O43257 154 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 SYT7O43581 403 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 DCXO43602 365 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 B4GALT2O60909 372 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CNOT3O75175 753 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 PDE9AO76083 593 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 OR4F21O95013 312 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 YES1P07947 543 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 FAM106CPP0CH98 169 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CEACAM1P13688 526 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ITGB6P18564 788 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 FCARP24071 287 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 PTPN6P29350 595 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 SRD5A2P31213 254 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 GNL1P36915 607 aaPredicted RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 TMPOP42166 694 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 ALDH3B1P43353 468 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 SLC1A6P48664 564 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CLCN4P51793 760 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 AIF1P55008 147 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 MAZP56270 477 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 NLRP11P59045 1033 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 NUCB2P80303 420 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CBX1P83916 185 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 EFEMP1Q12805 493 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 FOXF2Q12947 444 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 IFT88Q13099 833 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 MFAP5Q13361 173 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 MSLNQ13421 630 aaPredicted RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 FOXE3Q13461 319 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 HNF4GQ14541 408 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ZNF234Q14588 700 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 RCN1Q15293 331 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ZNF124Q15973 351 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 TATDN3Q17R31 274 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ANKRD55Q3KP44 614 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 GPAT3Q53EU6 434 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 PHLDA2Q53GA4 152 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ZNF542PQ5EBM4 170 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 EFHC1Q5JVL4 640 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 FNDC7Q5VTL7 733 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ERICH6BQ5W0A0 696 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 IL17RELQ6ZVW7 336 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 PAQR9Q6ZVX9 377 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 TECPR1Q7Z6L1 1165 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 YRDCQ86U90 279 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 LONP2Q86WA8 852 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 TMEM139Q8IV31 216 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 SLC22A9Q8IVM8 553 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CCDC60Q8IWA6 550 aaPredicted RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 CRYBG2Q8N1P7 616 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 SLC43A2Q8N370 569 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 BBOF1Q8ND07 529 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 SEMA6DQ8NFY4 1073 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 OR6C4Q8NGE1 309 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 ATP8B4Q8TF62 1192 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 WBP2Q969T9 261 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 BTBD9Q96Q07 612 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 URM1Q9BTM9 101 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 C5orf66Q9H5L9 145 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 TLE6Q9H808 572 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CRLF2Q9HC73 371 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 TRPC7Q9HCX4 862 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 PARD6AQ9NPB6 346 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 CHST11Q9NPF2 352 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 GLRX2Q9NS18 164 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 DDX28Q9NUL7 540 aaKnown RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 ZNF701Q9NV72 531 aaPredicted RBP3.51□□□□□ -1.85
TDP1-217ENST00000557782 RAB20Q9NX57 234 aa3.51□□□□□ -1.85
TDP1-217ENST00000557782 RDH8Q9NYR8 311 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms