RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 MVB12AQ96EY5 273 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 PTCD3Q96EY7 689 aaKnown RBP11.7□□□□□ -0.54
SYNE2-214ENST00000554928 SMIM10Q96HG1 83 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 CDK15Q96Q40 435 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 EHD1Q9H4M9 534 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 WDR54Q9H977 334 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 RRAGDQ9NQL2 400 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF282Q9UDV7 671 aaPredicted RBP11.7□□□□□ -0.54
SYNE2-214ENST00000554928 PCTPQ9UKL6 214 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 PADI2Q9Y2J8 665 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 RNF11Q9Y3C5 154 aa11.7□□□□□ -0.54
SYNE2-214ENST00000554928 CCDC189A1A4V9 331 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 GALR3O60755 368 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-214ENST00000554928 PDGFAP04085 211 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 RPS17P08708 135 aaKnown RBP11.69□□□□□ -0.54
SYNE2-214ENST00000554928 PIM1P11309 404 aaPredicted RBP11.69□□□□□ -0.54
SYNE2-214ENST00000554928 EPB42P16452 691 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 ALOX12P18054 663 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CASP2P42575 452 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CCR10P46092 362 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CDH13P55290 713 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 RGS1Q08116 209 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 PCDH1Q08174 1060 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 SSPNQ14714 243 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 TBCCQ15814 346 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 FAAH2Q6GMR7 532 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 UBE3DQ7Z6J8 389 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 KRT78Q8N1N4 520 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 OR51Q1Q8NH59 317 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 ACMSDQ8TDX5 336 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CCT6BQ92526 530 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 MIEF2Q96C03 454 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 C8orf44Q96CB5 159 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 MS4A6EQ96DS6 147 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CATSPER2Q96P56 530 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 F2RL3Q96RI0 385 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 C17orf62Q9BQA9 187 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CRB3Q9BUF7 120 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CAPS2Q9BXY5 557 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 NT5DC2Q9H857 520 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 NOL11Q9H8H0 719 aaKnown RBP11.69□□□□□ -0.54
SYNE2-214ENST00000554928 IPPKQ9H8X2 491 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 ANKHQ9HCJ1 492 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 P4HTMQ9NXG6 502 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 C3orf18Q9UK00 162 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 CDC14AQ9UNH5 594 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 PLAAQ9Y263 795 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 MAP4K5Q9Y4K4 846 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 SLC22A7Q9Y694 548 aa11.69□□□□□ -0.54
SYNE2-214ENST00000554928 LRIT2A6NDA9 550 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 H0YIG0 161 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 STX16-NPEPL1H3BU86 382 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 RTCAO00442 366 aaKnown RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 STX16O14662 325 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 SMIM24O75264 130 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 BMP10O95393 424 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 SERPINA6P08185 405 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 PCNAP12004 261 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 CREB1P16220 341 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 KRT15P19012 456 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 MMP11P24347 488 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 CXCR2P25025 360 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 XCR1P46094 333 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 AVPR1BP47901 424 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 OCA2Q04671 838 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 TRAF3Q13114 568 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 RAPSNQ13702 412 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 RASA2Q15283 850 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 UNC50Q53HI1 259 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 COLEC12Q5KU26 742 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 KIRREL2Q6UWL6 708 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 RAB43Q86YS6 212 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 MYLK4Q86YV6 388 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 LAS2Q8IYD9 372 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 MREGQ8N565 214 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 TBC1D19Q8N5T2 526 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 TRPV3Q8NET8 790 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 OR7G3Q8NG95 312 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF483Q8TF39 744 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF473Q8WTR7 871 aaKnown RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 APOBEC4Q8WW27 367 aaKnown RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 THAP4Q8WY91 577 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 PEX11GQ96HA9 241 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 QRFPRQ96P65 431 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 TMEM237Q96Q45 408 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 ARHGAP9Q9BRR9 750 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 EFCAB11Q9BUY7 163 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 SORBS1Q9BX66 1292 aaKnown RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 FAM117AQ9C073 453 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 ING2Q9H160 280 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 RHBGQ9H310 441 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 SEMA4BQ9NPR2 832 aaPredicted RBP11.68□□□□□ -0.54
SYNE2-214ENST00000554928 LANCL2Q9NS86 450 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 ZNF225Q9UK10 706 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 FBXL4Q9UKA2 621 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 ANGPTL3Q9Y5C1 460 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 PIEZO2Q9H5I5 2752 aa11.68□□□□□ -0.54
SYNE2-214ENST00000554928 SCN3AQ9NY46 2000 aa11.67□□□□□ -0.54
SYNE2-214ENST00000554928 A6NL46 340 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms