RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 BNIP2Q12982 314 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 PDE7AQ13946 482 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 SIM2Q14190 667 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TRIM25Q14258 630 aaKnown RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 CCDC6Q16204 474 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 RABL3Q5HYI8 236 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TJAP1Q5JTD0 557 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 CCNYL2Q5T2Q4 361 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 CPTPQ5TA50 214 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 ANXA8L1Q5VT79 327 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 FCRL6Q6DN72 434 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 ARMC6Q6NXE6 501 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 AAGABQ6PD74 315 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 OGFOD3Q6PK18 319 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 FIGLAQ6QHK4 219 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 PACS2Q86VP3 889 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 C1orf210Q8IVY1 113 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 MAML2Q8IZL2 1156 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 ARL14Q8N4G2 192 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 NT5CQ8TCD5 201 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 ZUFSPQ96AP4 578 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 COQ8BQ96D53 544 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 THAP11Q96EK4 314 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 PPM1MQ96MI6 270 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 DUSP26Q9BV47 211 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 SORBS1Q9BX66 1292 aaKnown RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 BHLHE41Q9C0J9 482 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 PAIP1Q9H074 479 aaKnown RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 MUC13Q9H3R2 512 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 SERHLQ9NQF3 203 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 HRASLS2Q9NWW9 162 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 SUSD2Q9UGT4 822 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 AP3M1Q9Y2T2 418 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 NEUROG3Q9Y4Z2 214 aa12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TP53BP1Q12888 1972 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-223ENST00000552480 TNRC6BQ9UPQ9 1833 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 GABRR3A8MPY1 467 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 RTCAO00442 366 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 DFNA5O60443 496 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 SCN2BO60939 215 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 STAMBPO95630 424 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 GBAP04062 536 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 FURINP09958 794 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 LAMP1P11279 417 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 PIM1P11309 404 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 GNSP15586 552 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 SSR2P43308 183 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 GSK3BP49841 420 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 MAPK12P53778 367 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 TAS2R50P59544 299 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 STXBP1P61764 594 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 TRA2BP62995 288 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 AP2B1P63010 937 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 PLIN5Q00G26 463 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 LIPEQ05469 1076 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 CYP4F3Q08477 520 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 C2orf80Q0P641 193 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 LRRC74AQ0VAA2 488 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 RCN1Q15293 331 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 DEFB133Q30KQ1 61 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 TOR1AIP1Q5JTV8 583 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 OR4C11Q6IEV9 310 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 KLHL35Q6PF15 583 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 UBE3DQ7Z6J8 389 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 ZNF761Q86XN6 746 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 MSRB3Q8IXL7 192 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 SRFBP1Q8NEF9 429 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 MS4A6EQ96DS6 147 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 CCDC115Q96NT0 180 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 ANKRD27Q96NW4 1050 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 SH3GL1Q99961 368 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 AICDAQ9GZX7 198 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 DDX31Q9H8H2 851 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 LHX9Q9NQ69 397 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 ATAD3AQ9NVI7 634 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 EVA1BQ9NVM1 165 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 VAPAQ9P0L0 249 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 NKX1-2Q9UD57 310 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 BTNL2Q9UIR0 455 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 PILRAQ9UKJ1 303 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 POMT2Q9UKY4 750 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 EXO1Q9UQ84 846 aaKnown RBP12.11□□□□□ -0.47
CACNB3-223ENST00000552480 CSNK1G3Q9Y6M4 447 aa12.11□□□□□ -0.47
CACNB3-223ENST00000552480 A0A0A6YYD5 115 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 PRSS51A0A1B0GVH4 220 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 H0Y3Z8 333 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 RNASET2O00584 256 aaKnown RBP12.1□□□□□ -0.47
CACNB3-223ENST00000552480 RFXANKO14593 260 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 PPM1DO15297 605 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 TBX19O60806 448 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 SDC3O75056 442 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 UBXN7O94888 489 aa12.1□□□□□ -0.47
CACNB3-223ENST00000552480 IL3P08700 152 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms