RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CTSLP07711 333 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 CCDC159P0C7I6 412 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 PABPC1P11940 636 aaKnown RBP13.57□□□□□ -0.24
INO80E-203ENST00000540562 RCVRNP35243 200 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 SERPINB10P48595 397 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 TBPL1P62380 186 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 KCNJ10P78508 379 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 DAB2P98082 770 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 PPIGQ13427 754 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■■■□ 24.3
INO80E-203ENST00000540562 PRSS53Q2L4Q9 553 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 ITFG2Q969R8 447 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 OR5M11Q96RB7 305 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 TMEM175Q9BSA9 504 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 ADPRHL2Q9NX46 363 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 GLOD5A6NK44 160 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 H3BM21 787 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 KPNA4O00629 521 aaPredicted RBP13.57□□□□□ -0.24
INO80E-203ENST00000540562 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
INO80E-203ENST00000540562 GCM2O75603 506 aaPredicted RBP13.57□□□□□ -0.24
INO80E-203ENST00000540562 GABARAPO95166 117 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 ELFN1P0C7U0 828 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 HSPB3Q12988 150 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 SLC5A12Q1EHB4 618 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 FIBINQ8TAL6 211 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 CLP1Q92989 425 aaKnown RBP13.57□□□□□ -0.24
INO80E-203ENST00000540562 UCN3Q969E3 161 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 TSEN34Q9BSV6 310 aaKnown RBP13.57□□□□□ -0.24
INO80E-203ENST00000540562 RDH14Q9HBH5 336 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 MS4A12Q9NXJ0 267 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 NDUFAF4Q9P032 175 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 PCDHB11Q9Y5F2 797 aa13.57□□□□□ -0.24
INO80E-203ENST00000540562 WWP2O00308 870 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 SGTAO43765 313 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 POP4O95707 220 aaKnown RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 ADRA2AP08913 450 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 CSF2RAP15509 400 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 SPNP16150 400 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 PSMA3P25788 255 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 RYKP34925 604 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 LSM11P83369 360 aaKnown RBP eCLIP13.56□□□□□ -0.243e-9■□□□□ 10.4
INO80E-203ENST00000540562 ST3GAL4Q11206 333 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 DOC2BQ14184 412 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 ZNF284Q2VY69 593 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 TCEAL5Q5H9L2 206 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 CBLL1Q75N03 491 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 EIF3MQ7L2H7 374 aaKnown RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 ARMCX6Q7L4S7 300 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 COMMD6Q7Z4G1 85 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 TSEN54Q7Z6J9 526 aaKnown RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 RBM45Q8IUH3 476 aaKnown RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 SLC7A5P1Q8MH63 180 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 TAGAPQ8N103 731 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 UBTD2Q8WUN7 234 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 TESCQ96BS2 214 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 SMAD5Q99717 465 aaKnown RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 YIPF4Q9BSR8 244 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 DSN1Q9H410 356 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 MAN2B2Q9Y2E5 1009 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 PRAMEF33A0A0G2JMD5 474 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 FEZF1A0PJY2 475 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 HIDE1A8MVS5 230 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 PRAMEF10O60809 474 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 C9P02748 559 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 TMEM115Q12893 351 aaPredicted RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 TOP3AQ13472 1001 aaPredicted RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 NFE2L1Q14494 772 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 PLPP6Q8IY26 295 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 ZNF300Q96RE9 604 aaPredicted RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 CCM2Q9BSQ5 444 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 DUSP21Q9H596 190 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 AKIP1Q9NQ31 210 aa13.56□□□□□ -0.24
INO80E-203ENST00000540562 NDRG4Q9ULP0 352 aaKnown RBP13.56□□□□□ -0.24
INO80E-203ENST00000540562 PPM1DO15297 605 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 NKX3-2P78367 333 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 MTA1Q13330 715 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 CAPN13Q6MZZ7 669 aaPredicted RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 NIPAL1Q6NVV3 410 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 DEF8Q6ZN54 512 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 WDR53Q7Z5U6 358 aaPredicted RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 ADCK2Q7Z695 626 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 CRIPAKQ8N1N5 446 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 VPS37AQ8NEZ2 397 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 PXYLP1Q8TE99 480 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 ZNF480Q8WV37 535 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 OVCA2Q8WZ82 227 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 TMEM203Q969S6 136 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 CAPNS2Q96L46 248 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 ZSWIM3Q96MP5 696 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 RDH12Q96NR8 316 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 MAGIXQ9H6Y5 334 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 DNAJC27Q9NZQ0 273 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 EXO1Q9UQ84 846 aaKnown RBP13.55□□□□□ -0.24
INO80E-203ENST00000540562 LYVE1Q9Y5Y7 322 aa13.55□□□□□ -0.24
INO80E-203ENST00000540562 DNMT3AQ9Y6K1 912 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms