RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 C7orf34Q96L11 122 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 COQ10AQ96MF6 247 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ASPSCR1Q9BZE9 553 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 GPN2Q9H9Y4 310 aaPredicted RBP11.07□□□□□ -0.64
C11orf54-214ENST00000540113 PLXND1Q9Y4D7 1925 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 COL4A3Q01955 1670 aa11.07□□□□□ -0.64
C11orf54-214ENST00000540113 ATG2AQ2TAZ0 1938 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 OTOL1A6NHN0 477 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 J3KTA2 159 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 M0R129 80 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 HOXC11O43248 304 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 FAM20BO75063 409 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 PSMB9P28065 219 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 TIA1P31483 386 aaKnown RBP eCLIP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 KRT20P35900 424 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 OPRL1P41146 370 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 RPP38P78345 283 aaKnown RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 TOP3AQ13472 1001 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 KCNC3Q14003 757 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 NFE2L1Q14494 772 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MOGQ16653 247 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 RAET1GQ6H3X3 334 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MED27Q6P2C8 311 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 Q6ZNX1 250 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MSANTD1Q6ZTZ1 278 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 COMMD6Q7Z4G1 85 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 CROCCP3Q8IVE0 287 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ETFBKMTQ8IXQ9 262 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 KLHDC8AQ8IYD2 350 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 C12orf76Q8N812 135 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ABHD11Q8NFV4 315 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 FBLIM1Q8WUP2 373 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ATL1Q8WXF7 558 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 BORCS5Q969J3 196 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 DTD2Q96FN9 168 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MAGED4Q96JG8 741 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 FOPNLQ96NB1 174 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 GABARAPL1Q9H0R8 117 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ARMC7Q9H6L4 198 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 TBC1D23Q9NUY8 699 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 RLIMQ9NVW2 624 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ENPP5Q9UJA9 477 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 TMEM98Q9Y2Y6 226 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 KCNE2Q9Y6J6 123 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 C2orf16Q68DN1 1984 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 SUV39H1O43463 412 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 PCDHGA12O60330 932 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 PRMT3O60678 531 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 CLPXO76031 633 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 KLHL18O94889 574 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ITIH1P19827 911 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 DGKEP52429 567 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MVKQ03426 396 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ITGADQ13349 1161 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 NR1D2Q14995 579 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MAD2L1BPQ15013 274 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 MPEG1Q2M385 716 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 RFX4Q33E94 735 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ZC3H12BQ5HYM0 836 aaKnown RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 TMEM236Q5W0B7 351 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 CAPN13Q6MZZ7 669 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ERAP2Q6P179 960 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 ERICH5Q6P6B1 374 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 AHSA2Q719I0 299 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 CELF5Q8N6W0 485 aaKnown RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 NFKBIDQ8NI38 313 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 HCAR2Q8TDS4 363 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 WFIKKN2Q8TEU8 576 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 RPL3LQ92901 407 aaKnown RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 SELENONQ9NZV5 590 aa11.06□□□□□ -0.64
C11orf54-214ENST00000540113 PNMA8BQ9ULN7 279 aaPredicted RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 CFAP20Q9Y6A4 193 aaKnown RBP11.06□□□□□ -0.64
C11orf54-214ENST00000540113 PRAMEF25A6NGN4 478 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 LILRB5O75023 590 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 LCKP06239 509 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 KLK1P06870 262 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 CCDC159P0C7I6 412 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 POU2F1P14859 743 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 HPCAL1P37235 193 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 MVDP53602 400 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 ITGA1P56199 1179 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 SLC35A2P78381 396 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 OCA2Q04671 838 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 UBE3AQ05086 875 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 C2orf80Q0P641 193 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 NPRL3Q12980 569 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 ADPRMQ3LIE5 342 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 ADGRD2Q7Z7M1 963 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 FAM124AQ86V42 546 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 NLRP8Q86W28 1048 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 SMYD1Q8NB12 490 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 RNF217Q8TC41 542 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 APH1BQ8WW43 257 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 RORBQ92753 470 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 SLC35A5Q9BS91 424 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 BRF2Q9HAW0 419 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 SPASTQ9UBP0 616 aa11.05□□□□□ -0.64
C11orf54-214ENST00000540113 NDRG4Q9ULP0 352 aaKnown RBP11.05□□□□□ -0.64
C11orf54-214ENST00000540113 DOLKQ9UPQ8 538 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms