RNA–Protein interactions for RNA: ENST00000516842.1

RNU6-557P-201, Transcript of RNA, U6 small nuclear 557, pseudogene, humanhuman

BASIC

Gene RNU6-557P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-557P-201ENST00000516842 LHX2P50458 406 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 F2RL1P55085 397 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 SNRPEP62304 92 aaKnown RBP-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 U2AF1Q01081 240 aaKnown RBP eCLIP-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 SRSF9Q13242 221 aaKnown RBP eCLIP-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 SLC39A6Q13433 755 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 PPP1R3AQ16821 1122 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 QRICH1Q2TAL8 776 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 ELFN2Q5R3F8 820 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 ATP1A1-AS1Q5TC04 95 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 TSSK4Q6SA08 328 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 SLC24A5Q71RS6 500 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 NEGR1Q7Z3B1 354 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 TMEM179BQ7Z7N9 219 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 C6orf223Q8N319 242 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 PPFIBP2Q8ND30 876 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 TVP23CQ96ET8 276 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 SLC35E1Q96K37 410 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 RCHY1Q96PM5 261 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 NEDD4LQ96PU5 975 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 OR5M11Q96RB7 305 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 MIS12Q9H081 205 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 OR51J1Q9H342 316 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 TLE6Q9H808 572 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 SPHK1Q9NYA1 384 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 HACD3Q9P035 362 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 INTS6Q9UL03 887 aaKnown RBP-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 VWDEQ8N2E2 1590 aa-0.76□□□□□ -2.53
RNU6-557P-201ENST00000516842 LRRK1Q38SD2 2015 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 YEATS2Q9ULM3 1422 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 TRAV40A0A0B4J280 105 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 EFCAB7A8K855 629 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 CCL24O00175 119 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 RNF103O00237 685 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 IPO5O00410 1097 aaKnown RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ABCD4O14678 606 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 NDUFS4O43181 175 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 MMP23AO75900 390 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 RCBTB2O95199 551 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 IGHV3-23P01764 117 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SMIM18P0DKX4 95 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 C4BPBP20851 252 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 WARSP23381 471 aaKnown RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 FCGR2BP31994 310 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 FCGR2CP31995 323 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 CTRLP40313 264 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ALDH3B1P43353 468 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 RAG2P55895 527 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 PEX3P56589 373 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 PDE7AQ13946 482 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 FASTKQ14296 549 aaKnown RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 DUSP5Q16690 384 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 CA9Q16790 459 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ECSCRQ19T08 205 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ZNF528Q3MIS6 628 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 FAM106AQ4KMX7 169 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SBK1Q52WX2 424 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 PCOTHQ58A44 107 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 C6orf136Q5SQH8 315 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 DCST2Q5T1A1 773 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ANKRD45Q5TZF3 282 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SAXO2Q658L1 398 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 RRM2BQ7LG56 351 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 MMD2Q8IY49 270 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 TCEAL8Q8IYN2 117 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ZBTB44Q8NCP5 570 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 OR2AJ1Q8NGZ0 328 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SLC25A38Q96DW6 304 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SPAG8Q99932 426 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 FOXC2Q99958 501 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 PAPOLGQ9BWT3 736 aaKnown RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 RANGRFQ9HD47 186 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SIRT7Q9NRC8 400 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SPG21Q9NZD8 308 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 APOBEC3BQ9UH17 382 aaKnown RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 SLC12A6Q9UHW9 1150 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 CRLS1Q9UJA2 301 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 FBXL4Q9UKA2 621 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 ELF5Q9UKW6 265 aaPredicted RBP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 NIP7Q9Y221 180 aaKnown RBP eCLIP-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 RNF24Q9Y225 148 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 TMED3Q9Y3Q3 217 aa-0.77□□□□□ -2.53
RNU6-557P-201ENST00000516842 COL22A1Q8NFW1 1626 aaPredicted RBP-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 PLA2R1Q13018 1463 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 A0A087WZ39 114 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 GOLGA6L10A0A0M3HER8 536 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 IQANK1A0A1B0GTG1 560 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 hCG_38984A0A1B0GV85 526 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 WWP2O00308 870 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 AP3D1O14617 1153 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 INPP4BO15327 924 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 SIGLEC5O15389 551 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 NBR2O15453 112 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 CYTIPO60759 359 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 KRT33AO76009 404 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 CD4P01730 458 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 TK1P04183 234 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 LAMP1P11279 417 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 SKILP12757 684 aa-0.78□□□□□ -2.53
RNU6-557P-201ENST00000516842 RARGP13631 454 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms