RNA–Protein interactions for RNA: ENST00000513405.1

AP001999.1-201, humanhuman

TSL 2 BASIC

Gene AP001999.1, Length 3,684 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001999.1-201ENST00000513405 SEC14L3Q9UDX4 400 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 FBXW2Q9UKT8 454 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 PCDHGB3Q9Y5G1 929 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 GPC6Q9Y625 555 aaPredicted RBP13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 FAM220BPB1ANY3 271 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 TMEM189-UBE2V1I3L0A0 370 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 UPK1AO00322 258 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 TLL1O43897 1013 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 IL3P08700 152 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 IGFBP1P08833 259 aaPredicted RBP13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 SOX6P35712 828 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 TARDBPQ13148 414 aaKnown RBP eCLIP13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 MTA1Q13330 715 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 MRPL58Q14197 206 aaKnown RBP13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 TRIM40Q6P9F5 258 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 GALNT7Q86SF2 657 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 RIMKLAQ8IXN7 391 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 TM9SF3Q9HD45 589 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 CXXC1Q9P0U4 656 aaPredicted RBP13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 RNF6Q9Y252 685 aa13.16□□□□□ -0.3
AP001999.1-201ENST00000513405 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 PCDH17O14917 1159 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 AP2A2O94973 939 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 NPPAP01160 153 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 C9P02748 559 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 EIF2S1P05198 315 aaKnown RBP13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 IMPDH2P12268 514 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 TBPL1P62380 186 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 HBA1P69905 142 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 SFSWAPQ12872 951 aaKnown RBP13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 WDR53Q7Z5U6 358 aaPredicted RBP13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 GHDCQ8N2G8 530 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 ATL1Q8WXF7 558 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 MYDGFQ969H8 173 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 RNF31Q96EP0 1072 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 SEMA3GQ9NS98 782 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 GSAPA4D1B5 854 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 FRS3O43559 492 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 SGTAO43765 313 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 FGF18O76093 207 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 C1SP09871 688 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 IFI30P13284 250 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 PPP2R2BQ00005 443 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 B4GALNT1Q00973 533 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 ELP6Q0PNE2 266 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 PPIGQ13427 754 aaKnown RBP eCLIP13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 C8orf82Q6P1X6 216 aaPredicted RBP13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 LRRC70Q7Z2Q7 622 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 PRR14Q9BWN1 585 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 GORASP2Q9H8Y8 452 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 C8orf4Q9NR00 106 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 SIRT5Q9NXA8 310 aa13.15□□□□□ -0.3
AP001999.1-201ENST00000513405 ANKRD33BA6NCL7 494 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 WNT9AO14904 365 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 TNFRSF21O75509 655 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 GSTT2P0CG29 244 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 GSTT2BP0CG30 244 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 RPS7P62081 194 aaKnown RBP13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 C2orf15Q8WU43 125 aaKnown RBP13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 DEPDC7Q96QD5 511 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 STOX2Q9P2F5 926 aaPredicted RBP13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 PCDHGA10Q9Y5H3 936 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 HCFC2Q9Y5Z7 792 aa13.15□□□□□ -0.31
AP001999.1-201ENST00000513405 BRCA1P38398 1863 aaKnown RBP13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 FAM155AB1AL88 458 aaPredicted RBP13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 WWP2O00308 870 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 MYL12BO14950 172 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 KCNK5O95279 499 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 IFNW1P05000 195 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 EPHX1P07099 455 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ADH1AP07327 375 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ZDHHC11BP0C7U3 371 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 PRR35P0CG20 571 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 BMP4P12644 408 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 SSR2P43308 183 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ZFP36L2P47974 494 aaKnown RBP13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 GAB1Q13480 694 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 TPRG1LQ5T0D9 272 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 XAF1Q6GPH4 301 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 COMMD6Q7Z4G1 85 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 TCEANCQ8N8B7 351 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ASB11Q8WXH4 323 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ZNF347Q96SE7 839 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 SLC12A9Q9BXP2 914 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ALOXE3Q9BYJ1 711 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 YTHDF1Q9BYJ9 559 aaKnown RBP13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 SLC29A3Q9BZD2 475 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 TDP1Q9NUW8 608 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 ANKRD28O15084 1053 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 WISP3O95389 354 aaPredicted RBP13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 JUPP14923 745 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 PSMB5P28074 263 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 DEFA1P59665 94 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 DEFA3P59666 94 aa13.14□□□□□ -0.31
AP001999.1-201ENST00000513405 RAB8AP61006 207 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms