RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	TLE6	Q9H808	572 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	TMEM181	Q9P2C4	612 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	PPP2R2C	Q9Y2T4	447 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	BRWD1	Q9NSI6	2320 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	LTBP2	Q14767	1821 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	TRIO	O75962	3097 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	COL4A6	Q14031	1691 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	VPS13A	Q96RL7	3174 aa		4.92	□□□□□ -1.62
LINC01088-208	ENST00000511895	KTN1	Q86UP2	1357 aa	Known RBP	4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	CNOT1	A5YKK6	2376 aa	Known RBP	4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	NDUFAF8	A1L188	74 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	ANTXRL	A6NF34	631 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	CDK2AP2	O75956	126 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	NXPH2	O95156	264 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	ACHE	P22303	614 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	LHCGR	P22888	699 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	HOXD10	P28358	340 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	NF2	P35240	595 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	PPP5C	P53041	499 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	KYNU	Q16719	465 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	BSPRY	Q5W0U4	402 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	TMED8	Q6PL24	325 aa	Predicted RBP	4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	RBPMS2	Q6ZRY4	209 aa	Known RBP	4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	KRT74	Q7RTS7	529 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	ASCL5	Q7RTU5	278 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	KRTAP7-1	Q8IUC3	87 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	OR8H2	Q8N162	312 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	DCLK2	Q8N568	766 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	ZNF614	Q8N883	585 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	BMPER	Q8N8U9	685 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	SMAP2	Q8WU79	429 aa	Predicted RBP	4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	MRPS27	Q92552	414 aa	Known RBP	4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	AZIN2	Q96A70	460 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	CENPT	Q96BT3	561 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	RMDN1	Q96DB5	314 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	CFAP57	Q96MR6	1250 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	NECTIN4	Q96NY8	510 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	MUS81	Q96NY9	551 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	EGLN1	Q9GZT9	426 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	PPP1R3C	Q9UQK1	317 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	ANGPTL3	Q9Y5C1	460 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895		R4GN57	208 aa		4.91	□□□□□ -1.62
LINC01088-208	ENST00000511895	NCAPD2	Q15021	1401 aa		4.9	□□□□□ -1.62
LINC01088-208	ENST00000511895	COL1A1	P02452	1464 aa	Predicted RBP	4.9	□□□□□ -1.62
LINC01088-208	ENST00000511895	IGLV7-46	A0A075B6I9	117 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895		A0A1B0GU03	582 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	UBE2C	O00762	179 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	MAGEC1	O60732	1142 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	RPS6KA5	O75582	802 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	CLDN1	O95832	211 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	TBX6	O95947	436 aa	Predicted RBP	4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	EEF1D	P29692	281 aa	Known RBP	4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	ALDH3A2	P51648	485 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	PAX9	P55771	341 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	GSDMD	P57764	484 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	XKR6	Q5GH73	641 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	FIP1L1	Q6UN15	594 aa	Known RBP	4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	STXBP4	Q6ZWJ1	553 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	BTN2A1	Q7KYR7	527 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	OR10G8	Q8NGN5	311 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	OR10Q1	Q8NGQ4	319 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	KCNE4	Q8WWG9	221 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	SPSB1	Q96BD6	273 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	TRIM51	Q9BSJ1	452 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	MCRIP2	Q9BUT9	160 aa	Known RBP	4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	SLC2A11	Q9BYW1	496 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	MTMR12	Q9C0I1	747 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	TXNDC16	Q9P2K2	825 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	MAN1B1	Q9UKM7	699 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	CHKB	Q9Y259	395 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	RTL1	A6NKG5	1358 aa		4.9	□□□□□ -1.63
LINC01088-208	ENST00000511895	FPGT	O14772	594 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	AP5Z1	O43299	807 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	DCX	O43602	365 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	DUS4L	O95620	317 aa	Known RBP	4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	CSN3	P07498	182 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	SLC2A2	P11168	524 aa	Predicted RBP	4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	ERCC2	P18074	760 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	RPS12	P25398	132 aa	Known RBP	4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	VAMP7	P51809	220 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	CAMK2D	Q13557	499 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	HLA-B	Q31612	363 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	WLS	Q5T9L3	541 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	OR4A47	Q6IF82	309 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	UGT3A1	Q6NUS8	523 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	TLK2	Q86UE8	772 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	MAML2	Q8IZL2	1156 aa	Predicted RBP	4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	KLHDC1	Q8N7A1	406 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	PI4KAP1	Q8N8J0	262 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	NOA1	Q8NC60	698 aa	Known RBP	4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	CCDC191	Q8NCU4	936 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	PROX1	Q92786	737 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	CNDP2	Q96KP4	475 aa	Known RBP	4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	C10orf90	Q96M02	699 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895		Q9H8V8	135 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	TERF2IP	Q9NYB0	399 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	CHD7	Q9P2D1	2997 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895	PFAS	O15067	1338 aa		4.89	□□□□□ -1.63
LINC01088-208	ENST00000511895		A0A1W2PP64	1363 aa		4.89	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms