RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 CNPY4Q8N129 248 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 OR5T3Q8NGG3 340 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 MIEF2Q96C03 454 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 NSUN5Q96P11 429 aaKnown RBP17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 TRIM55Q9BYV6 548 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 RHBGQ9H310 441 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 MKKSQ9NPJ1 570 aaPredicted RBP17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 PCTPQ9UKL6 214 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 EMCNQ9ULC0 261 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 ANGPTL3Q9Y5C1 460 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 NUP210LQ5VU65 1888 aa17.28■□□□□ 0.36
PDLIM7-216ENST00000506537 ARGFXA6NJG6 315 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 DNAJB6O75190 326 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 JRKO75564 520 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 CLEC3AO75596 197 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 DNAJB5O75953 348 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 GSTA1P08263 222 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 RPS17P08708 135 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 SMIM10L1P0DMW3 83 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 KRT15P19012 456 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 GSTM2P28161 218 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 RAB8AP61006 207 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 OCA2Q04671 838 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 LAPTM5Q13571 262 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 PAGE2BQ5JRK9 111 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 GRHL2Q6ISB3 625 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 RPS27LQ71UM5 84 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 LAS2Q8IYD9 372 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 LSM14AQ8ND56 463 aaKnown RBP17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 TTLQ8NG68 377 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 SLC39A7Q92504 469 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 SMIM10Q96HG1 83 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 SEC16BQ96JE7 1060 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 ARHGAP9Q9BRR9 750 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 YIPF2Q9BWQ6 316 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 TGIF2Q9GZN2 237 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 ZBTB26Q9HCK0 441 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 C14orf105Q9NVL8 296 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 HS3ST3B1Q9Y662 390 aa17.27■□□□□ 0.36
PDLIM7-216ENST00000506537 MED13Q9UHV7 2174 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 TLDC2A0PJX2 215 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 LRIT2A6NDA9 550 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 MASP2O00187 686 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 SOCS6O14544 535 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 OR7A17O14581 309 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 DLX3O60479 287 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 MMP11P24347 488 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 OLR1P78380 273 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 ADPRMQ3LIE5 342 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 ABHD13Q7L211 337 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 APLFQ8IW19 511 aaPredicted RBP17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 OR52B6Q8NGF0 335 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 OR51Q1Q8NH59 317 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 CCT6BQ92526 530 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 MS4A6EQ96DS6 147 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 CRB3Q9BUF7 120 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 IPPKQ9H8X2 491 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 ACSS2Q9NR19 701 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 P4HTMQ9NXG6 502 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 LGALS13Q9UHV8 139 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 C3orf18Q9UK00 162 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 PLAAQ9Y263 795 aa17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 TLN1Q9Y490 2541 aaKnown RBP17.26■□□□□ 0.35
PDLIM7-216ENST00000506537 ANKDD1BA6NHY2 528 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 IDSB3KWA1 339 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 GLRA3O75311 464 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 BMP10O95393 424 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 PRB1P04280 392 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 XCR1P46094 333 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 PIK3CGP48736 1102 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 TRAF3Q13114 568 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 KCNAB2Q13303 367 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 MED27Q6P2C8 311 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 C4orf33Q8N1A6 199 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 RIBC1Q8N443 379 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 RNF175Q8N4F7 328 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 OR7G3Q8NG95 312 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 ZNF483Q8TF39 744 aaPredicted RBP17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 ZNF473Q8WTR7 871 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 GAL3ST3Q96A11 431 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 CDK15Q96Q40 435 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 TMEM237Q96Q45 408 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 C1QTNF3Q9BXJ4 246 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 ING2Q9H160 280 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 NOL11Q9H8H0 719 aaKnown RBP17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 ACTR8Q9H981 624 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 SEMA3GQ9NS98 782 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 DCDC2Q9UHG0 476 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 RNF11Q9Y3C5 154 aa17.25■□□□□ 0.35
PDLIM7-216ENST00000506537 A0A0G2JN53 185 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 A0A1B0GTL3 188 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 ERI3O43414 337 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 PCNAP12004 261 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 KRT4P19013 534 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 STXBP1P61764 594 aaKnown RBP17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 SLC18A2Q05940 514 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 IFFO1Q0D2I5 559 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 HIST2H2ACQ16777 129 aaPredicted RBP17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 LIPJQ5W064 366 aa17.24■□□□□ 0.35
PDLIM7-216ENST00000506537 FAM219BQ5XKK7 198 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms