RNA–Protein interactions for RNA: ENST00000498514.5

SGMS1-205, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-205ENST00000498514 PSG7Q13046 419 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 PCK2Q16822 640 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 AGAP6Q5VW22 663 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SNX30Q5VWJ9 437 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 KRT79Q5XKE5 535 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 REP15Q6BDI9 236 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 RFWD3Q6PCD5 774 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 CARNMT1Q8N4J0 409 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 C1orf131Q8NDD1 294 aaKnown RBP1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SRSF12Q8WXF0 261 aaKnown RBP1.12□□□□□ -2.23
SGMS1-205ENST00000498514 ROBO4Q8WZ75 1007 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 TSACCQ96A04 125 aaPredicted RBP1.12□□□□□ -2.23
SGMS1-205ENST00000498514 NXPE2Q96DL1 559 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SPACA9Q96E40 222 aaPredicted RBP1.12□□□□□ -2.23
SGMS1-205ENST00000498514 LURAP1Q96LR2 239 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 ANKRD27Q96NW4 1050 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 ALKBH3Q96Q83 286 aaPredicted RBP1.12□□□□□ -2.23
SGMS1-205ENST00000498514 HSD17B14Q9BPX1 270 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SLC25A39Q9BZJ4 359 aaPredicted RBP1.12□□□□□ -2.23
SGMS1-205ENST00000498514 FZD8Q9H461 694 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 OSGEPL1Q9H4B0 414 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SAGE1Q9NXZ1 904 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 POLKQ9UBT6 870 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SLC12A6Q9UHW9 1150 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 SETBP1Q9Y6X0 1596 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 ARHGAP23Q9P227 1491 aa1.12□□□□□ -2.23
SGMS1-205ENST00000498514 CUL9Q8IWT3 2517 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 SETXQ7Z333 2677 aaKnown RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 TRBV5-4A0A0C4DH59 114 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 A0A1W2PPQ1 181 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 FAM231BA6NCW3 169 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 FOXI3A8MTJ6 420 aaPredicted RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 A8MVM7 634 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 SIGLEC5O15389 551 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 CD4P01730 458 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 DNASE1P24855 282 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 RPL9P32969 192 aaKnown RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 PPM1FP49593 454 aaPredicted RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 SLC25A1P53007 311 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 RASGEF1BQ0VAM2 473 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 HSPB3Q12988 150 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 MAMLD1Q13495 774 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 CUL3Q13618 768 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 ECSCRQ19T08 205 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 TEX35Q5T0J7 233 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 CPEB2Q7Z5Q1 589 aaKnown RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 ZNF595Q8IYB9 648 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 DND1Q8IYX4 353 aaKnown RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 ZNF540Q8NDQ6 660 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 ADAMTS16Q8TE57 1224 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 GANCQ8TET4 914 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 PTPMT1Q8WUK0 201 aaPredicted RBP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 USP6NLQ92738 828 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 EXOC4Q96A65 974 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 FTOQ9C0B1 505 aaKnown RBP eCLIP1.11□□□□□ -2.23
SGMS1-205ENST00000498514 SDCBP2Q9H190 292 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 GSN-AS1Q9NRJ2 163 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 BPTFQ12830 3046 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 IL16Q14005 1332 aa1.11□□□□□ -2.23
SGMS1-205ENST00000498514 BAHCC1Q9P281 2608 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 IGKV2D-24A0A075B6R9 120 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 CCT8L1PA6NM43 557 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 A8MV72 311 aaPredicted RBP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 TCP10L2B9ZVM9 353 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 RPS6KA5O75582 802 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 CD5P06127 495 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 ZNF44P15621 663 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 SFTPDP35247 375 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 MATR3P43243 847 aaKnown RBP eCLIP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 CDH13P55290 713 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 GNB2P62879 340 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 CXCL6P80162 114 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 AIMP2Q13155 320 aaKnown RBP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 ABRAXAS2Q15018 415 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 NONOQ15233 471 aaKnown RBP eCLIP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 NPTX1Q15818 432 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 KCTD19Q17RG1 926 aaPredicted RBP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 IGSF11Q5DX21 431 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 ZNF691Q5VV52 312 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 LIPJQ5W064 366 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 OTPQ5XKR4 325 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 CCDC60Q8IWA6 550 aaPredicted RBP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 RYBPQ8N488 228 aaPredicted RBP1.1□□□□□ -2.23
SGMS1-205ENST00000498514 RASGEF1AQ8N9B8 481 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 MCUQ8NE86 351 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 BEST4Q8NFU0 473 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 ATL1Q8WXF7 558 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 C7orf26Q96N11 449 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 TECTBQ96PL2 329 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 CCT8L2Q96SF2 557 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 ITPAQ9BY32 194 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 NEU3Q9UQ49 428 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 ARAP1Q96P48 1450 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 VCANP13611 3396 aa1.1□□□□□ -2.23
SGMS1-205ENST00000498514 TDRD9Q8NDG6 1382 aaKnown RBP1.09□□□□□ -2.23
SGMS1-205ENST00000498514 MED1Q15648 1581 aaPredicted RBP1.09□□□□□ -2.23
SGMS1-205ENST00000498514 DNHD1Q96M86 4753 aa1.09□□□□□ -2.23
SGMS1-205ENST00000498514 IGKV1D-17A0A075B6S4 117 aa1.09□□□□□ -2.23
SGMS1-205ENST00000498514 LOC390937A0A1W2PQ73 354 aa1.09□□□□□ -2.23
SGMS1-205ENST00000498514 A8MU76 341 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms