RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 ZNF436Q9C0F3 470 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CCDC90BQ9GZT6 254 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 DNTTIP1Q9H147 329 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CPVLQ9H3G5 476 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TOR3AQ9H497 397 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PCIF1Q9H4Z3 704 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 FAM124BQ9H5Z6 455 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 WDR55Q9H6Y2 383 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 GORASP2Q9H8Y8 452 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 IL1RAPQ9NPH3 570 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ENTPD7Q9NQZ7 604 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SMYD2Q9NRG4 433 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PLSCR3Q9NRY6 295 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RASSF1Q9NS23 344 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 KRT84Q9NSB2 600 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ZNF275Q9NSD4 429 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CATSPERZQ9NTU4 200 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TRMT13Q9NUP7 481 aaKnown RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 HPF1Q9NWY4 346 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM260Q9NX78 707 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RNF186Q9NXI6 227 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 HSPBP1Q9NZL4 362 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PFDN2Q9UHV9 154 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 FBXL7Q9UJT9 491 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 ABCG2Q9UNQ0 655 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 COPS3Q9UNS2 423 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 AKT3Q9Y243 479 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 RNF6Q9Y252 685 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 DERAQ9Y315 318 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 CBY1Q9Y3M2 126 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 HSPB11Q9Y547 144 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PCDHGB7Q9Y5F8 929 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 PCDHA9Q9Y5H5 950 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 GMPPBQ9Y5P6 360 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 AP1M2Q9Y6Q5 423 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 X6R8D5 127 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 COL11A1P12107 1806 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-212ENST00000477520 SMCHD1A6NHR9 2005 aa4.55□□□□□ -1.68
PTCD3-212ENST00000477520 A0A087X1B8 175 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 A0A096LPK6 155 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C17orf113A0A1B0GUU1 675 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 hCG_1807616A0A1W2PRN6 198 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TCRBV7S3A2A0A539 114 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 B4DXG7 233 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 H3BQ06 376 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 NME4O00746 187 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 INPP4BO15327 924 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ADAM12O43184 909 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PSMD3O43242 534 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 DPM1O60762 260 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 HUS1O60921 280 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ITGA10O75578 1167 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RECQL5O94762 991 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KLHL18O94889 574 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 WDR47O94967 919 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RASGRP1O95267 797 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 HLA-DQB1P01920 261 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PRKCGP05129 697 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C2P06681 752 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 APRTP07741 180 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ANXA6P08133 673 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 FGF4P08620 206 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PRKAR1AP10644 381 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PEPDP12955 493 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RPS2P15880 293 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 VAMP1P23763 118 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ATP5F1P24539 256 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 POU1F1P28069 291 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CD6P30203 668 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 HOXA6P31267 233 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MSX2P35548 267 aaPredicted RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SREBF1P36956 1147 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 GRIA1P42261 906 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 ATP5OP48047 213 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 NRIP1P48552 1158 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RORCP51449 518 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 LIMK1P53667 647 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 MAPK10P53779 464 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 AIF1P55008 147 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PRMT2P55345 433 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 RAG2P55895 527 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SNX16P57768 344 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 NCS1P62166 190 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SP3Q02447 781 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CSTF3Q12996 717 aaKnown RBP4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PRPSAP1Q14558 356 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KCTD2Q14681 263 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 KCNAB1Q14722 419 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM132BQ14DG7 1078 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PON2Q15165 354 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CARTPTQ16568 116 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 SLC35G1Q2M3R5 365 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 FAM214AQ32MH5 1076 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TRIM60Q495X7 471 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 CCDC157Q569K6 752 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 FAM209BQ5JX69 171 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 C1orf220Q5T0J3 134 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 PDZK1Q5T2W1 519 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 AGBL4Q5VU57 503 aa4.54□□□□□ -1.68
PTCD3-212ENST00000477520 TMEM236Q5W0B7 351 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms