RNA–Protein interactions for RNA: ENST00000467353.1

CPS1-205, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 323 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-205ENST00000467353 CPEB2Q7Z5Q1 589 aaKnown RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 RPS19BP1Q86WX3 136 aaKnown RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 LRRC49Q8IUZ0 686 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 PSTKQ8IV42 348 aaKnown RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 CCDC103Q8IW40 242 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 C2orf73Q8N5S3 287 aaPredicted RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 TTC29Q8NA56 475 aaPredicted RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 ZFP62Q8NB50 900 aaPredicted RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 ZBTB34Q8NCN2 500 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 NAXEQ8NCW5 288 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 M1APQ8TC57 530 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 ZNF398Q8TD17 642 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 C10orf90Q96M02 699 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 CCL19Q99731 98 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 STK33Q9BYT3 514 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 REG4Q9BYZ8 158 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 NUP62CLQ9H1M0 184 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 TRIM45Q9H8W5 580 aaPredicted RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 ZWILCHQ9H900 591 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 MMP25Q9NPA2 562 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 TRMT1Q9NXH9 659 aaKnown RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 ALKBH4Q9NXW9 302 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 OR6C2Q9NZP2 312 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 H2AFY2Q9P0M6 372 aaPredicted RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 GMPR2Q9P2T1 348 aaKnown RBP3.96□□□□□ -1.78
CPS1-205ENST00000467353 MAN1B1Q9UKM7 699 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 CTNND2Q9UQB3 1225 aa3.96□□□□□ -1.78
CPS1-205ENST00000467353 CCDC88CQ9P219 2028 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 GLYATL1P3A0A0U1RQE8 302 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 A0A1B0GVC2 190 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 BICDL2A1A5D9 508 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 OR14I1A6ND48 311 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 TMEM191CA6NGB0 347 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 HSPB2A8KAH6 182 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 FAM166BA8MTA8 275 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 KDM4EB2RXH2 506 aaPredicted RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 F8VZ95 297 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 H3BML4 177 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 KLRC4-KLRK1H3BQV0 150 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ZNF561-AS1K7EIQ3 104 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 DDX3XO00571 662 aaKnown RBP eCLIP3.95□□□□□ -1.78
CPS1-205ENST00000467353 NDC80O14777 642 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 BCKDKO14874 412 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 H2AFYO75367 372 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 ZNF205O95201 554 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 GOSR1O95249 250 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 SMC2O95347 1197 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 EIF2S1P05198 315 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 CALB1P05937 261 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 UCHL3P15374 230 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 PAX1P15863 534 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 CCNCP24863 283 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 IL1R2P27930 398 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ACADLP28330 430 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 TRHRP34981 398 aaPredicted RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 THBS2P35442 1172 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 CYB561P49447 251 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 AGFG1P52594 562 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 ZNF135P52742 658 aaPredicted RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 WNT3P56703 355 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 PPIAP62937 165 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 SNRPNP63162 240 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 MAT1AQ00266 395 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 MAMLD1Q13495 774 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 PKP1Q13835 747 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ZNF267Q14586 743 aaPredicted RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 NOMO1Q15155 1222 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 HSPB2Q16082 182 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 DPYSL2Q16555 572 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 MAN2A1Q16706 1144 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 PRTGQ2VWP7 1150 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 CYP27C1Q4G0S4 372 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 C1orf185Q5T7R7 199 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 FBXO42Q6P3S6 717 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 RNF111Q6ZNA4 994 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 C22orf34Q6ZV56 151 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ESPNLQ6ZVH7 1005 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 MDGA2Q7Z553 956 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ANKRD37Q7Z713 158 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ZNF677Q86XU0 584 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 KIF2BQ8N4N8 673 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 SLC5A8Q8N695 610 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 LINC01555Q8NAE3 123 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 TNIP2Q8NFZ5 429 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 SPATA22Q8NHS9 363 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 HM13Q8TCT9 377 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 IGFBPL1Q8WX77 278 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 METTL21AQ8WXB1 218 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 SMPDL3BQ92485 455 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 FATE1Q969F0 183 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 SMARCE1Q969G3 411 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 TADA1Q96BN2 335 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 MVB12AQ96EY5 273 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 ZBED6CLQ96FA7 236 aaPredicted RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 IMP4Q96G21 291 aaKnown RBP3.95□□□□□ -1.78
CPS1-205ENST00000467353 PTCHD1Q96NR3 888 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 DACH2Q96NX9 599 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 TSGA13Q96PP4 275 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 SMC6Q96SB8 1091 aa3.95□□□□□ -1.78
CPS1-205ENST00000467353 BEX2Q9BXY8 128 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms