RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 MTERF3Q96E29 417 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 OMA1Q96E52 524 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 DAZAP1Q96EP5 407 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 SLC35A4Q96G79 324 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 KRT12Q99456 494 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 FDXACB1Q9BRP7 624 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 PRRG3Q9BZD7 231 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MMP27Q9H306 513 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 LRRN3Q9H3W5 708 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 PCIF1Q9H4Z3 704 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MINDY3Q9H8M7 445 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 FN3KRPQ9HA64 309 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 SMURF2Q9HAU4 748 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 G6PC2Q9NQR9 355 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZNF302Q9NR11 478 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 TXLNGQ9NUQ3 528 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 PNPOQ9NVS9 261 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 KCMF1Q9P0J7 381 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 SLCO3A1Q9UIG8 710 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 NAGKQ9UJ70 344 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 ABCG2Q9UNQ0 655 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MN1Q10571 1320 aaPredicted RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 ZNF521Q96K83 1311 aa5.21□□□□□ -1.58
VPS41-209ENST00000457055 MYBBP1AQ9BQG0 1328 aaKnown RBP5.21□□□□□ -1.58
VPS41-209ENST00000457055 A0A0C4DFX4 3053 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 RGPD2P0DJD1 1756 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CCDC187A0A096LP49 1063 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PVALEFA0A1B0GWK0 134 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PIPSLA2A3N6 862 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CBY3A6NI87 242 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CD8B2A6NJW9 211 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ANXA2P2A6NMY6 339 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ATP6V1G2-DDX39BF2Z307 99 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 GPAA1O43292 621 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TLX3O43711 291 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 MAGEC1O60732 1142 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 HCN1O60741 890 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TULP3O75386 442 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TOX4O94842 621 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 SLCO2B1O94956 709 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 SNAI1O95863 264 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 IFNA16P05015 189 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 VSIG10L2P0DP72 767 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 AKR1A1P14550 325 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CDH2P19022 906 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 GABRB3P28472 473 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PKLRP30613 574 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 HOXA7P31268 230 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 ICAM3P32942 547 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 HTR7P34969 479 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 EIF2S3P41091 472 aaKnown RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 CASRP41180 1078 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ACTR1BP42025 376 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 GPD2P43304 727 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 MAGEA2P43356 314 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 JAK3P52333 1124 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 ZNF135P52742 658 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 PRKAG1P54619 331 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PEX3P56589 373 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 AP3S2P59780 193 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 UBE2G2P60604 165 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 RPL23AP62750 156 aaKnown RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 SP2Q02086 613 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TSPAN31Q12999 210 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 SNTA1Q13424 505 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 MADCAM1Q13477 382 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PEX6Q13608 980 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 IL11RAQ14626 422 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 FAM189A2Q15884 450 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 UGT8Q16880 541 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 DEFB115Q30KQ5 88 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 USP41Q3LFD5 358 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 IFI44LQ53G44 452 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CT83Q5H943 113 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TTC38Q5R3I4 469 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PRAMEF9Q5VWM5 478 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 MRNIPQ6NTE8 343 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 STOX1Q6ZVD7 989 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 LUZP2Q86TE4 346 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 VRK2Q86Y07 508 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 CCDC28AQ8IWP9 274 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 CDK20Q8IZL9 346 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 C1orf52Q8N6N3 182 aaKnown RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 PCDH20Q8N6Y1 951 aaKnown RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 RASGEF1AQ8N9B8 481 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 TC2NQ8N9U0 490 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 FAM47BQ8NA70 645 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PLA2G15Q8NCC3 412 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 SLC17A8Q8NDX2 589 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 DBF4BQ8NFT6 615 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 OR5M1Q8NGP8 315 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 RNASE11Q8TAA1 199 aaKnown RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 SLC25A43Q8WUT9 341 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 ELMO1Q92556 727 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 LPGAT1Q92604 370 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 EAF2Q96CJ1 260 aaPredicted RBP5.2□□□□□ -1.58
VPS41-209ENST00000457055 LINGO1Q96FE5 620 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 LRIG1Q96JA1 1093 aa5.2□□□□□ -1.58
VPS41-209ENST00000457055 PBKQ96KB5 322 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms