RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 CACNA1AO00555 2505 aa8.46□□□□□ -1.05
SMC6-204ENST00000428868 A0A1W2PQM1 296 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 CPED1A4D0V7 1026 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 LRIT2A6NDA9 550 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 H0YGG7 62 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 TMPRSS11DO60235 418 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 DNAJB6O75190 326 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 PRKRAO75569 313 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 SORBS2O94875 1100 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 KLK1P06870 262 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SNRPB2P08579 225 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 KRT16P08779 473 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ANXA4P09525 319 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 ZNF888P0CJ79 500 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 PRPS2P11908 318 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 GLB1P16278 677 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 EFNA1P20827 205 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 JAK1P23458 1154 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 HRH2P25021 359 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 PTX3P26022 381 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 CERS1P27544 350 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 PTPN4P29074 926 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ADSLP30566 484 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 GRK3P35626 688 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 AHRP35869 848 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 GABRA4P48169 554 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ACADVLP49748 655 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 NUDT2P50583 147 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 POLR2JP52435 117 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 PLA2G16P53816 162 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 EPHA4P54764 986 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RAB8AP61006 207 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ARF3P61204 181 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 RPS15AP62244 130 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 PHEXP78562 749 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 PLIN5Q00G26 463 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ACTN3Q08043 901 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 MAD2L1Q13257 205 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 RCAN2Q14206 197 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RPS6KA2Q15349 733 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 TLR1Q15399 786 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 NR0B2Q15466 257 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 UGT8Q16880 541 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 PROX2Q3B8N5 592 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ADPRMQ3LIE5 342 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SPIN4Q56A73 249 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SPANXN4Q5MJ08 99 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 CACHD1Q5VU97 1274 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SLC2A7Q6PXP3 512 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 USP53Q70EK8 1073 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 PRSS41Q7RTY9 318 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RABEPKQ7Z6M1 372 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ASPGQ86U10 573 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RIMKLAQ8IXN7 391 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 OR7A2PQ8NGA2 310 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RP9Q8TA86 221 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.46□□□□□ -1.06
SMC6-204ENST00000428868 NT5CQ8TCD5 201 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 C16orf78Q8WTQ4 265 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 MS4A6EQ96DS6 147 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 TM4SF19Q96DZ7 209 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SPDL1Q96EA4 605 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RNF31Q96EP0 1072 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 LOXL4Q96JB6 756 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 CLPTM1LQ96KA5 538 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ZFYVE21Q9BQ24 234 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 C17orf62Q9BQA9 187 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SLC39A3Q9BRY0 314 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 RTKNQ9BST9 563 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 TRIM8Q9BZR9 551 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 DPY30Q9C005 99 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SLC6A16Q9GZN6 736 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 CLMPQ9H6B4 373 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 STARD5Q9NSY2 213 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 SIRT5Q9NXA8 310 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 TEX10Q9NXF1 929 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 MAP10Q9P2G4 905 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 ANKMY1Q9P2S6 941 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 GMPR2Q9P2T1 348 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 RUVBL1Q9Y265 456 aaKnown RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 TMED5Q9Y3A6 229 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 NEUROG3Q9Y4Z2 214 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 MN1Q10571 1320 aaPredicted RBP8.46□□□□□ -1.06
SMC6-204ENST00000428868 PTPRBP23467 1997 aa8.46□□□□□ -1.06
SMC6-204ENST00000428868 OTOGLQ3ZCN5 2332 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 GNG14A0A1W2PPG7 69 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 FAM234BA2RU67 622 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 TLCD2A6NGC4 264 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 A8MUI8 341 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 FXYD1O00168 92 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 AGRPO00253 132 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 MRASO14807 208 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 KHNYNO15037 678 aaKnown RBP8.45□□□□□ -1.06
SMC6-204ENST00000428868 YKT6O15498 198 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 ERI3O43414 337 aaKnown RBP8.45□□□□□ -1.06
SMC6-204ENST00000428868 PCDHGA12O60330 932 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 DNAJC8O75937 253 aaPredicted RBP8.45□□□□□ -1.06
SMC6-204ENST00000428868 SEMA3DO95025 777 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 C1QCP02747 245 aa8.45□□□□□ -1.06
SMC6-204ENST00000428868 EIF2S1P05198 315 aaKnown RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms