RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 SH3BP4Q9P0V3 963 aa12.99□□□□□ -0.33
LRCH3-203ENST00000425562 UNC80Q8N2C7 3258 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 GRXCR2A6NFK2 248 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 TMEM88BA6NKF7 163 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 PLD2O14939 933 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CLDN9O95484 217 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 RHOCP08134 193 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 PSKH1P11801 424 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CKBP12277 381 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 MYL9P24844 172 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 MAD2L1Q13257 205 aaPredicted RBP12.98□□□□□ -0.33
LRCH3-203ENST00000425562 VEPH1Q14D04 833 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 PTCHD4Q6ZW05 846 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 IFNL1Q8IU54 200 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 STK40Q8N2I9 435 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 SLC7A6Q92536 515 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 FOXJ1Q92949 421 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 DYRK4Q9NR20 520 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 DNMT3LQ9UJW3 386 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 RPS6KA6Q9UK32 745 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 SLC22A14Q9Y267 594 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 HSPB11Q9Y547 144 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 MTX2O75431 263 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CDRT1O95170 752 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 KRT6AP02538 564 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 KRT6BP04259 564 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CYP17A1P05093 508 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 HLA-EP13747 358 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 ATF6P18850 670 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 KRT6CP48668 564 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CLDN8P56748 225 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CHRNEQ04844 493 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 DSC1Q08554 894 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 ZXDCQ2QGD7 858 aaPredicted RBP12.98□□□□□ -0.33
LRCH3-203ENST00000425562 BTBD16Q32M84 506 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 COX20Q5RI15 118 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 TIGD4Q8IY51 512 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 SYT14Q8NB59 555 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 HCAR2Q8TDS4 363 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 SOCS4Q8WXH5 440 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 VPS35Q96QK1 796 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 SMAD5Q99717 465 aaKnown RBP12.98□□□□□ -0.33
LRCH3-203ENST00000425562 MGME1Q9BQP7 344 aa12.98□□□□□ -0.33
LRCH3-203ENST00000425562 MBD1Q9UIS9 605 aaPredicted RBP12.98□□□□□ -0.33
LRCH3-203ENST00000425562 CASP8AP2Q9UKL3 1982 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 SRCP12931 536 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 ETFAP13804 333 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 PTGER3P43115 390 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 KCNJ10P78508 379 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 KRR1Q13601 381 aaKnown RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 FAHD1Q6P587 224 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 SLC24A5Q71RS6 500 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 TSEN54Q7Z6J9 526 aaKnown RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 MEX3DQ86XN8 651 aaKnown RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 PLPP6Q8IY26 295 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 ST13P5Q8NFI4 369 aaPredicted RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 FCGR1BQ92637 280 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 C7orf34Q96L11 122 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 CFL2Q9Y281 166 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 HSPE1-MOB4S4R3N1 261 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 V9GYH0 126 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 COL4A4P53420 1690 aaPredicted RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 ACSL4O60488 711 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 YES1P07947 543 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 CNR2P34972 360 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 RPIAP49247 311 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 ITGA1P56199 1179 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 YBEYP58557 167 aaPredicted RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 LRRC74AQ0VAA2 488 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 DBPQ10586 325 aaPredicted RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 CSTF3Q12996 717 aaKnown RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 HNRNPA0Q13151 305 aaKnown RBP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 CDH18Q13634 790 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 EFR3AQ14156 821 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 UGT8Q16880 541 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 HKDC1Q2TB90 917 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 PDZK1Q5T2W1 519 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 LRIF1Q5T3J3 769 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 CARNMT1Q8N4J0 409 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 TMCO6Q96DC7 493 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 FUBP3Q96I24 572 aaKnown RBP eCLIP12.97□□□□□ -0.33
LRCH3-203ENST00000425562 GABARAPL1Q9H0R8 117 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 NDUFAF4Q9P032 175 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 SPEF1Q9Y4P9 236 aa12.97□□□□□ -0.33
LRCH3-203ENST00000425562 SAP18O00422 153 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 CLDN7O95471 211 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 EPOP01588 193 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 EPORP19235 508 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 CORO1AP31146 461 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 DDOSTP39656 456 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 RGS4P49798 205 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 GAB1Q13480 694 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 BOP1Q14137 746 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 PTGES3Q15185 160 aaKnown RBP12.96□□□□□ -0.33
LRCH3-203ENST00000425562 C22orf42Q6IC83 251 aa12.96□□□□□ -0.33
LRCH3-203ENST00000425562 NOXRED1Q6NXP6 359 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms