RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-205	ENST00000409952	CETN2	P41208	172 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	NKX2-1	P43699	371 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	RASSF2	P50749	326 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PDX1	P52945	283 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PRRX1	P54821	245 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	AIF1	P55008	147 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	HERV-K104	P63124	156 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	CX3CL1	P78423	397 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	KLC1	Q07866	573 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PLD1	Q13393	1074 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	RFTN1	Q14699	578 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PHKG1	Q16816	387 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PAPD7	Q5XG87	772 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	OR4A47	Q6IF82	309 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	IL17REL	Q6ZVW7	336 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	LGI2	Q8N0V4	545 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	TTC5	Q8N0Z6	440 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	BHLHE23	Q8NDY6	225 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	ZNF548	Q8NEK5	533 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	OR10Q1	Q8NGQ4	319 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	ATP8B4	Q8TF62	1192 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	NT5C3B	Q969T7	300 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	TSACC	Q96A04	125 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	LGALS12	Q96DT0	336 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	SLC41A3	Q96GZ6	507 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	TMEM19	Q96HH6	336 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	C4orf36	Q96KX1	117 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	BTBD9	Q96Q07	612 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	GSDMA	Q96QA5	445 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	NDN	Q99608	321 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	CBWD1	Q9BRT8	395 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	DUSP26	Q9BV47	211 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	CRNKL1	Q9BZJ0	848 aa	Known RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	GPR61	Q9BZJ8	451 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	ZMYND12	Q9H0C1	365 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	SDCBP2	Q9H190	292 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	LRMDA	Q9H2I8	198 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	ARRDC1-AS1	Q9H2J1	176 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	RIMS4	Q9H426	269 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	CLSTN2	Q9H4D0	955 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PCDH9	Q9HC56	1237 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	HYPK	Q9NX55	129 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	GDAP2	Q9NXN4	497 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	SPHK1	Q9NYA1	384 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	RDH8	Q9NYR8	311 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	PSME2	Q9UL46	239 aa		4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	COL11A2	P13942	1736 aa	Predicted RBP	4.55	□□□□□ -1.68
LSM5-205	ENST00000409952	ZNF804B	A4D1E1	1349 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952		A0A0U1RQS6	177 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	MED7	O43513	233 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	BUB1	O43683	1085 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CACNG3	O60359	315 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PROP1	O75360	226 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CLN5	O75503	358 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	ECI2	O75521	394 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	BBOX1	O75936	387 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	SOX30	O94993	753 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	OR4F21	O95013	312 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CA3	P07451	260 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	FGF2	P09038	288 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	ACP2	P11117	423 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CSF2RA	P15509	400 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	NAGA	P17050	411 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	FCAR	P24071	287 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PPP2R1A	P30153	589 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	SRD5A2	P31213	254 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CHI3L1	P36222	383 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	SLC6A8	P48029	635 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	NR2C2	P49116	596 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PEX5	P50542	639 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	ELL	P55199	621 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	ZP1	P60852	638 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PDE1B	Q01064	536 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CDH18	Q13634	790 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	RCN1	Q15293	331 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	INPP5J	Q15735	1006 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	CCDC57	Q2TAC2	916 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	POM121L1P	Q3SYA9	428 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	AGK	Q53H12	422 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PARM1	Q6UWI2	310 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	BNIPL	Q7Z465	357 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	LONP2	Q86WA8	852 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	FAM131B	Q86XD5	332 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	OR52K1	Q8NGK4	314 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	OR8J1	Q8NGP2	316 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	IRGQ	Q8WZA9	623 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PIGT	Q969N2	578 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	PHF21A	Q96BD5	680 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	RAB39B	Q96DA2	213 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	JPH2	Q9BR39	696 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	MIS12	Q9H081	205 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	GAN	Q9H2C0	597 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	MARCH7	Q9H992	704 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	NOX4	Q9NPH5	578 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	HPS4	Q9NQG7	708 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	FAM114A2	Q9NRY5	505 aa		4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	TRNAU1AP	Q9NX07	287 aa	Known RBP	4.54	□□□□□ -1.68
LSM5-205	ENST00000409952	TEKT2	Q9UIF3	430 aa		4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms