RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 SPIN1Q9Y657 262 aaPredicted RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 NYNRINQ9P2P1 1898 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 TRBC2A0A5B9 178 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PIPSLA2A3N6 862 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SLC28A2O43868 658 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 CACNG3O60359 315 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 JRKO75564 520 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PSKH1P11801 424 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PIK3CBP42338 1070 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 NTHL1P78549 312 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 FOXM1Q08050 763 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SCARB2Q14108 478 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 ZSWIM7Q19AV6 140 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 TBRG1Q3YBR2 411 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 LAIR2Q6ISS4 152 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PRR23CQ6ZRP0 262 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 KRT74Q7RTS7 529 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 THOC6Q86W42 341 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 ENTHD1Q8IYW4 607 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PARP16Q8N5Y8 322 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SYT14Q8NB59 555 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PPCDCQ96CD2 204 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 XKR8Q9H6D3 395 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SPATA7Q9P0W8 599 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 ZNF221Q9UK13 617 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 YIPF1Q9Y548 306 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 WNT6Q9Y6F9 365 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 BRWD1Q9NSI6 2320 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SULT1C4O75897 302 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 GALTP07902 379 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 FPR1P21462 350 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 TUFMP49411 452 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 MANFP55145 182 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 SELENBP1Q13228 472 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 PPIGQ13427 754 aaKnown RBP eCLIP8.02□□□□□ -1.133e-7■■■□□ 18.3
SNX13-201ENST00000409076 TYSND1Q2T9J0 566 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 NXNL2Q5VZ03 156 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 CRTC1Q6UUV9 634 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 IL20RBQ6UXL0 311 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 CYP4Z2PQ8N1L4 340 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 METTL4Q8N3J2 472 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SVOPLQ8N434 492 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 B3GNT7Q8NFL0 401 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 ENKURQ8TC29 256 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SMAP2Q8WU79 429 aaPredicted RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 FOPNLQ96NB1 174 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 COL21A1Q96P44 957 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 FYTTD1Q96QD9 318 aaKnown RBP8.02□□□□□ -1.13
SNX13-201ENST00000409076 BRINP2Q9C0B6 783 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 KCTD5Q9NXV2 234 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 SLC13A4Q9UKG4 626 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 RIMKLBQ9ULI2 386 aa8.02□□□□□ -1.13
SNX13-201ENST00000409076 OR6C70A6NIJ9 312 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GABRR3A8MPY1 467 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 FAM155AB1AL88 458 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 WASH3PC4AMC7 463 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 M0R3H8 397 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 SLC22A1O15245 554 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 RFPL2O75678 378 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 LRG1P02750 347 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 RPLP0P05388 317 aaKnown RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 ACRV1P26436 265 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 METAP1P53582 386 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GALNT1Q10472 559 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 HNRNPA0Q13151 305 aaKnown RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 TOP3AQ13472 1001 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 PIN1Q13526 163 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 HIST2H2ACQ16777 129 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 DUOXA1Q1HG43 343 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ZNF284Q2VY69 593 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 KLHL12Q53G59 568 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 OR2G6Q5TZ20 316 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 AGTRAPQ6RW13 159 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 USP45Q70EL2 814 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 VN1R5Q7Z5H4 357 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 LAX1Q8IWV1 398 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 LEMD2Q8NC56 503 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 OR6Q1Q8NGQ2 317 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 DPF3Q92784 378 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 GGHQ92820 318 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 TMEM246Q9BRR3 403 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 EMILIN2Q9BXX0 1053 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CERS4Q9HA82 394 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CCL26Q9Y258 94 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 PSMB5P28074 263 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 INSL4Q14641 139 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 SLC35F1Q5T1Q4 408 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 SDE2Q6IQ49 451 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 NCEH1Q6PIU2 408 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 USP30Q70CQ3 517 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 C11orf65Q8NCR3 313 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 HUS1BQ8NHY5 278 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 S100ZQ8WXG8 99 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 SLC35B4Q969S0 331 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 C8orf48Q96LL4 319 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 TRIB3Q96RU7 358 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 TM9SF2Q99805 663 aa8.01□□□□□ -1.13
SNX13-201ENST00000409076 CPPED1Q9BRF8 314 aaPredicted RBP8.01□□□□□ -1.13
SNX13-201ENST00000409076 ASPNQ9BXN1 380 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms