RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 ENAMQ9NRM1 1142 aa13□□□□□ -0.33
GSE1-202ENST00000393243 ZNF701Q9NV72 531 aaPredicted RBP13□□□□□ -0.33
GSE1-202ENST00000393243 ADAMTS3O15072 1205 aa13□□□□□ -0.33
GSE1-202ENST00000393243 PVALBP20472 110 aaPredicted RBP13□□□□□ -0.33
GSE1-202ENST00000393243 RBM39Q14498 530 aaKnown RBP13□□□□□ -0.33
GSE1-202ENST00000393243 LRRC66Q68CR7 880 aa13□□□□□ -0.33
GSE1-202ENST00000393243 NUSAP1Q9BXS6 441 aaKnown RBP13□□□□□ -0.33
GSE1-202ENST00000393243 FBXL12Q9NXK8 326 aa13□□□□□ -0.33
GSE1-202ENST00000393243 CREG1O75629 220 aa13□□□□□ -0.33
GSE1-202ENST00000393243 AIMP2Q13155 320 aaKnown RBP13□□□□□ -0.33
GSE1-202ENST00000393243 RAB39AQ14964 217 aa13□□□□□ -0.33
GSE1-202ENST00000393243 TATDN1Q6P1N9 297 aa13□□□□□ -0.33
GSE1-202ENST00000393243 CMTM8Q8IZV2 173 aa13□□□□□ -0.33
GSE1-202ENST00000393243 OR6N2Q8NGY6 317 aa13□□□□□ -0.33
GSE1-202ENST00000393243 CNIH3Q8TBE1 160 aa13□□□□□ -0.33
GSE1-202ENST00000393243 AKAP1Q92667 903 aaKnown RBP eCLIP13□□□□□ -0.334e-6■■■□□ 17.7
GSE1-202ENST00000393243 RDH12Q96NR8 316 aa13□□□□□ -0.33
GSE1-202ENST00000393243 TRIM36Q9NQ86 728 aa13□□□□□ -0.33
GSE1-202ENST00000393243 DKKL1Q9UK85 242 aa13□□□□□ -0.33
GSE1-202ENST00000393243 CLEC3AO75596 197 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ADH5P11766 374 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 MAGEA8P43361 318 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 GRIK2Q13002 908 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 BIRC7Q96CA5 298 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 FBXL18Q96ME1 805 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 CD180Q99467 661 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 IGSF9Q9P2J2 1179 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 AFDNP55196 1824 aaKnown RBP12.99□□□□□ -0.33
GSE1-202ENST00000393243 POP7O75817 140 aaKnown RBP12.99□□□□□ -0.33
GSE1-202ENST00000393243 INHAP05111 366 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 GNSP15586 552 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 AGXTP21549 392 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ACADVLP49748 655 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 GSK3BP49841 420 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 HERV-K104P61576 105 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 MSS51Q4VC12 460 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ASB9Q96DX5 294 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ATG5Q9H1Y0 275 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 PAX3P23760 479 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 NR4A2P43354 598 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ZNF81P51508 661 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 PNLIPRP1P54315 467 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 RPP38P78345 283 aaKnown RBP12.99□□□□□ -0.33
GSE1-202ENST00000393243 SLC39A4Q6P5W5 647 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 OR51G2Q8NGK0 314 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 RNF39Q9H2S5 420 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 KCNN3Q9UGI6 736 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ILVBLA1L0T0 632 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 ISPDA4D126 451 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 TVP23AA6NH52 213 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 DUXAA6NLW8 204 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 PROM1O43490 865 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 DLX3O60479 287 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 RAB36O95755 333 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 FBXL22Q6P050 247 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 NCEH1Q6PIU2 408 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 OR2S2Q9NQN1 319 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 KIAA0930Q6ICG6 404 aaPredicted RBP12.99□□□□□ -0.33
GSE1-202ENST00000393243 FANK1Q8TC84 345 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 TMEM80Q96HE8 168 aa12.99□□□□□ -0.33
GSE1-202ENST00000393243 UNGP13051 313 aaPredicted RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 LCN1P31025 176 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 FUT2Q10981 343 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 MAB21L1Q13394 359 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 LIPKQ5VXJ0 399 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 MSANTD3Q96H12 275 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 SLC25A44Q96H78 314 aaPredicted RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 MAN2C1Q9NTJ4 1040 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 TAS2R10Q9NYW0 307 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 CFL2Q9Y281 166 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 BCKDHAP12694 445 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 SCNN1AP37088 669 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 MAGEA3P43357 314 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 LAS2Q8IYD9 372 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 CCDC116Q8IYX3 515 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 S100A16Q96FQ6 103 aaKnown RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 RIMS1Q86UR5 1692 aaKnown RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 CD8B2A6NJW9 211 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 H0YGN5 161 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 HMGN1P05114 100 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 CD8BP10966 210 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 SPIN4Q56A73 249 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 LRRTM4Q86VH4 590 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 TDRPQ86YL5 185 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 CMTM7Q96FZ5 175 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 TSPAN18Q96SJ8 248 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 HTR3EA5X5Y0 456 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 C9J4A7 227 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 HMGB3O15347 200 aaKnown RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 PER3P56645 1201 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 AURKBQ96GD4 344 aaPredicted RBP12.98□□□□□ -0.33
GSE1-202ENST00000393243 SLC30A2Q9BRI3 323 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 OR8D2Q9GZM6 311 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 PTGDR2Q9Y5Y4 395 aa12.98□□□□□ -0.33
GSE1-202ENST00000393243 TMEM88BA6NKF7 163 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms