RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 HSDL1Q3SXM5 330 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CXorf57Q6NSI4 855 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 WDR53Q7Z5U6 358 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 MFSD3Q96ES6 412 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SAP130Q9H0E3 1048 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SDCBP2Q9H190 292 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 AGO4Q9HCK5 861 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 C1orf109Q9NX04 203 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TEX10Q9NXF1 929 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PIN4Q9Y237 131 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SLC6A5Q9Y345 797 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SMIM30A4D0T7 59 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SYNDIG1LA6NDD5 238 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TCAF2A6NFQ2 919 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 B4DXG7 233 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PCDH17O14917 1159 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 FGF18O76093 207 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 HLA-DPB1P04440 258 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 STSP08842 583 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 EDN3P14138 238 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CPB1P15086 417 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 INCA1Q0VD86 236 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 NOL9Q5SY16 702 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PKN3Q6P5Z2 889 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 RNF111Q6ZNA4 994 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM151AQ8N4L1 468 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 DNAJC5GQ8N7S2 189 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 FCRL3Q96P31 734 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 NFKBIZQ9BYH8 718 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PRMT7Q9NVM4 692 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 VAPAQ9P0L0 249 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 NOCTQ9UK39 431 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 FBXL2Q9UKC9 423 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PCDHGA9Q9Y5G4 932 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 XRN1Q8IZH2 1706 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 LINC00587B1AMM8 73 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM233B4DJY2 109 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 LRRN3E7EW58 273 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 LGALS8O00214 317 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SIX6O95475 246 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 EPOP01588 193 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SUPT20HL2P0C7V6 817 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 ADORA2BP29275 332 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 ICAM3P32942 547 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SLC1A3P43003 542 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 HSPA7P48741 367 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CLCN5P51795 746 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 EPHA5P54756 1037 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CDH8P55286 799 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CACNB2Q08289 660 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 FAM189A2Q15884 450 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PAN2Q504Q3 1202 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SCIMPQ6UWF3 145 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SLC9B2Q86UD5 537 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PSTKQ8IV42 348 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 DENND1CQ8IV53 801 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TEX19Q8NA77 164 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 KDF1Q8NAX2 398 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 GTF3C2Q8WUA4 911 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 THRSPQ92748 146 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 ELP4Q96EB1 424 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 MFFQ9GZY8 342 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 LRRN3Q9H3W5 708 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SPATA6Q9NWH7 488 aaPredicted RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CPA4Q9UI42 421 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 C10orf71Q711Q0 1435 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 SRPRAP08240 638 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 UBBP0CG47 229 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 UBCP0CG48 685 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 HDCP19113 662 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CYP2B6P20813 491 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PSMB4P28070 264 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 RPS19P39019 145 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 RPS27AP62979 156 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 UBA52P62987 128 aaKnown RBP10.09□□□□□ -0.79
PRDM1-201ENST00000369089 DYRK1AQ13627 763 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 PROX2Q3B8N5 592 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 CERCAMQ5T4B2 595 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 NXNL2Q5VZ03 156 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 MFSD14CQ5VZR4 134 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM88Q6PEY1 159 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 KDELC1Q6UW63 502 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 DHRS4Q9BTZ2 278 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 MARK1Q9P0L2 795 aa10.09□□□□□ -0.79
PRDM1-201ENST00000369089 TMEM72A0PK05 275 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 SDHDO14521 159 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 PRKYO43930 277 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 GRIN3BO60391 1043 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 DDNO94850 711 aaPredicted RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 MAT2AP31153 395 aaKnown RBP10.08□□□□□ -0.8
PRDM1-201ENST00000369089 SSTR4P31391 388 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 RGS4P49798 205 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 RAP2BP61225 183 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 CDC42EP1Q00587 391 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 TMEM132DQ14C87 1099 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 ZBTB6Q15916 424 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 ARHGAP40Q5TG30 622 aa10.08□□□□□ -0.8
PRDM1-201ENST00000369089 CNIH2Q6PI25 160 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms