RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 TFAP2CQ92754 450 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 APIPQ96GX9 242 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 MAPKAP1Q9BPZ7 522 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 DPEP2Q9H4A9 486 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF222Q9UK12 451 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 CSF2RAP15509 400 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 RCVRNP35243 200 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 KCNC1P48547 511 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 TXNL4AP83876 142 aaKnown RBP15.77■□□□□ 0.12
SCAF1-201ENST00000360565 CD47Q08722 323 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 TRIM71Q2Q1W2 868 aaKnown RBP15.77■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF311Q5JNZ3 666 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 PGBD5Q8N414 524 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 TTLQ8NG68 377 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 IL17FQ96PD4 163 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 NEUROD4Q9HD90 331 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 ELOVL2Q9NXB9 296 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 DNAJC27Q9NZQ0 273 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 PCDHB11Q9Y5F2 797 aa15.77■□□□□ 0.12
SCAF1-201ENST00000360565 EDDM13A0A1B0GTR0 161 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 RIIAD1A6NNX1 92 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 SSNA1O43805 119 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 MITFO75030 526 aaPredicted RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 TFAP2AP05549 437 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 RHOP08100 348 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 C1GALT1C1LP0DN25 315 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 LAMP1P11279 417 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 CLCN2P51788 898 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 PTPRRQ15256 657 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 FBXO43Q4G163 708 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 KLHL35Q6PF15 583 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 ZNF433Q8N7K0 673 aaPredicted RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 COX18Q8N8Q8 333 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 RTP3Q9BQQ7 232 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 RPRD1BQ9NQG5 326 aaKnown RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 MROH6A6NGR9 719 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 SCN2BO60939 215 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 C8orf89P0DMQ9 161 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 SRCP12931 536 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 HOXD9P28356 352 aaPredicted RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 DNASE1L3Q13609 305 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 SH2D5Q6ZV89 423 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 RANBP3LQ86VV4 465 aaPredicted RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 NATD1Q8N6N6 113 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 OR10H4Q8NGA5 316 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 RBM18Q96H35 190 aaKnown RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 CRELD1Q96HD1 420 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 TUBA1CQ9BQE3 449 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 DOHHQ9BU89 302 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 AGPAT4Q9NRZ5 378 aa15.77■□□□□ 0.11
SCAF1-201ENST00000360565 MAGED1Q9Y5V3 778 aaPredicted RBP15.77■□□□□ 0.11
SCAF1-201ENST00000360565 C7orf72A4D263 438 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TTC34A8MYJ7 566 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 SLC16A5O15375 505 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 NDUFS4O43181 175 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 NDUFB5O43674 189 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 HCN1O60741 890 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 LATS1O95835 1130 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 ST3GAL4Q11206 333 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 RAB33AQ14088 237 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 OTUD1Q5VV17 481 aaPredicted RBP15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TRAM1L1Q8N609 369 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 PROKR1Q8TCW9 393 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 NETO1Q8TDF5 533 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 GPR151Q8TDV0 419 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 POF1BQ8WVV4 589 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 PPP1R14BQ96C90 147 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 CAMK1GQ96NX5 476 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 INPP5KQ9BT40 448 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 RNF38Q9H0F5 515 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 ANKRA2Q9H9E1 313 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 SLC1A7O00341 560 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 RFPL2O75678 378 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 CH25HO95992 272 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 DCTP40126 519 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 STAT5AP42229 794 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 KCNC4Q03721 635 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 NPRL3Q12980 569 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 NADSYN1Q6IA69 706 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TCEANCQ8N8B7 351 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 GPR26Q8NDV2 337 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 HUS1BQ8NHY5 278 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 FIBINQ8TAL6 211 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 UFD1Q92890 307 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 ISL2Q96A47 359 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TMCO6Q96DC7 493 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 IL1RAPQ9NPH3 570 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 B4GAT1O43505 415 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 SLC16A8O95907 504 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 GSRP00390 522 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 ALPPL2P10696 532 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 PSMA3P25788 255 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 RORCP51449 518 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TBPL1P62380 186 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TYSND1Q2T9J0 566 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TMEM236Q5W0B7 351 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 TAF8Q7Z7C8 310 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 SLC22A16Q86VW1 577 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 KCT2Q8NC54 265 aa15.76■□□□□ 0.11
SCAF1-201ENST00000360565 OMA1Q96E52 524 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms