RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 RHBDF1Q96CC6 855 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 LRIG1Q96JA1 1093 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 KLHL15Q96M94 604 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SUSD2Q9UGT4 822 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 RP2O75695 350 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 CD36P16671 472 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 UQCRC2P22695 453 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 ZNF84P51523 738 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 OR2T5Q6IEZ7 315 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 MMAAQ8IVH4 418 aaKnown RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 ARL14EPQ8N8R7 260 aaPredicted RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 OR2T29Q8NH02 315 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SHKBP1Q8TBC3 707 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 KCNH6Q9H252 994 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 POMPQ9Y244 141 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 MST1RQ04912 1400 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 EBLN1P0CF75 366 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SUOXP51687 545 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 SWT1Q5T5J6 900 aaKnown RBP9.39□□□□□ -0.91
CUX1-203ENST00000360264 MBLAC2Q68D91 279 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 RAB7BQ96AH8 199 aa9.39□□□□□ -0.91
CUX1-203ENST00000360264 MIA3Q5JRA6 1907 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 SLC16A5O15375 505 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ELNP15502 786 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PREPP48147 710 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 CIR1Q86X95 450 aaPredicted RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 CILP2Q8IUL8 1156 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 AQP11Q8NBQ7 271 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 OR2AP1Q8NGE2 309 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 LRRN4Q8WUT4 740 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 LRTOMTQ8WZ04 291 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TMEM131LA2VDJ0 1609 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 DIRAS3O95661 229 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 HLA-DQB2P05538 268 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 CTBP2P56545 445 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 KCT2Q8NC54 265 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TM9SF3Q9HD45 589 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 RIMKLBQ9ULI2 386 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 FZD1Q9UP38 647 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 SCGB1D2O95969 90 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PTGS2P35354 604 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PPM1JQ5JR12 505 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ZNF781Q8N8C0 355 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 FCAMRQ8WWV6 532 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TMEM80Q96HE8 168 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 NECTIN4Q96NY8 510 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 GOLGA2P5Q9HBQ8 144 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TP73O15350 636 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 CLCNKAP51800 687 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 USF2Q15853 346 aaPredicted RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 KLHL13Q9P2N7 655 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 DHDHQ9UQ10 334 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 NPIPA2E9PIF3 369 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 NPIPA3F8WFD2 350 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 JMJD7P0C870 316 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 KCNC4Q03721 635 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TMEM225Q6GV28 225 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 XKRXQ6PP77 449 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 IQCKQ8N0W5 287 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 KCNJ9Q92806 393 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 URM1Q9BTM9 101 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 TAS2R10Q9NYW0 307 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 RTCAO00442 366 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 E2F3O00716 465 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 CD72P21854 359 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ASPAP45381 313 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ARL6IP1Q15041 203 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PMM1Q92871 262 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 DERL2Q9GZP9 239 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 RCCD1A6NED2 376 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 H7C417 338 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 FOSL2P15408 326 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 SIM2Q14190 667 aaPredicted RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 ENPP7Q6UWV6 458 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TRAM1L1Q8N609 369 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ZFP3Q96NJ6 502 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ADAP2Q9NPF8 381 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 YES1P07947 543 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 SHMT2P34897 504 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 S100A10P60903 97 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 RPS15AP62244 130 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 HSD11B2P80365 405 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PMS2P3Q13401 168 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 ZNF584Q8IVC4 421 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 CNN2Q99439 309 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 STRA6Q9BX79 667 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PAK1IP1Q9NWT1 392 aaPredicted RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 GNG8Q9UK08 70 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 A8MU76 341 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 YAP1P46937 504 aaKnown RBP9.38□□□□□ -0.91
CUX1-203ENST00000360264 GLT8D1Q68CQ7 371 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 LRRC66Q68CR7 880 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TAS1R3Q7RTX0 852 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 LNX2Q8N448 690 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 FAM110BQ8TC76 370 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 TM9SF4Q92544 642 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PLCL2Q9UPR0 1127 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 A0A1W2PRQ8 180 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 PEX2P28328 305 aa9.38□□□□□ -0.91
CUX1-203ENST00000360264 OR2B6P58173 313 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms