RNA–Protein interactions for RNA: ENST00000293889.10

CCDC78-201, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC78, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-201ENST00000293889 OR4N4Q8N0Y3 316 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 THAP11Q96EK4 314 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 NAF1Q96HR8 494 aaKnown RBP16.98■□□□□ 0.31
CCDC78-201ENST00000293889 SLC41A2Q96JW4 573 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 MAELQ96JY0 434 aaKnown RBP16.98■□□□□ 0.31
CCDC78-201ENST00000293889 CCDC74BQ96LY2 380 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 OR52B2Q96RD2 323 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 BRF2Q9HAW0 419 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 PDE7BQ9NP56 450 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 STOML1Q9UBI4 398 aa16.98■□□□□ 0.31
CCDC78-201ENST00000293889 MDC1Q14676 2089 aaKnown RBP16.98■□□□□ 0.31
CCDC78-201ENST00000293889 H0YGG7 62 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 SLC28A1O00337 649 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 SH3BGRLO75368 114 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 CLEC3AO75596 197 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 TGFB1P01137 390 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 SERPIND1P05546 499 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 ANKRD34CP0C6C1 535 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 HSD3B1P14060 373 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 HSD3B2P26439 372 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 ARL4DP49703 201 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 ARF3P61204 181 aaPredicted RBP16.97■□□□□ 0.31
CCDC78-201ENST00000293889 PHEXP78562 749 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 E2F1Q01094 437 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 CSTF3Q12996 717 aaKnown RBP16.97■□□□□ 0.31
CCDC78-201ENST00000293889 BLMHQ13867 455 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 DEFB110Q30KQ9 67 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 ZC3H12BQ5HYM0 836 aaKnown RBP16.97■□□□□ 0.31
CCDC78-201ENST00000293889 KMT5CQ86Y97 462 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 MCATQ8IVS2 390 aaKnown RBP16.97■□□□□ 0.31
CCDC78-201ENST00000293889 D2HGDHQ8N465 521 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 RCBTB1Q8NDN9 531 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 TRPV3Q8NET8 790 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 WDR48Q8TAF3 677 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 TUBGCP3Q96CW5 907 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 MACROD1Q9BQ69 325 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 NMUR2Q9GZQ4 415 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 C1orf21Q9H246 121 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 AKTIPQ9H8T0 292 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 GIMAP2Q9UG22 337 aa16.97■□□□□ 0.31
CCDC78-201ENST00000293889 MAP3K7O43318 606 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 RGS14O43566 566 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 SERPINA6P08185 405 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 ACADSP16219 412 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 NELFEP18615 380 aaKnown RBP16.96■□□□□ 0.31
CCDC78-201ENST00000293889 ATP6V1C1P21283 382 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 GSTM2P28161 218 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 GABRA4P48169 554 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 KCNAB1Q14722 419 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 IMPG1Q17R60 797 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 DGLUCYQ7Z3D6 616 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 B3GNT8Q7Z7M8 397 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 ASPGQ86U10 573 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 TM4SF19Q96DZ7 209 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 CCDC106Q9BWC9 280 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 MS4A8Q9BY19 250 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 OR51B5Q9H339 312 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 RIC8BQ9NVN3 520 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 PPT2Q9UMR5 302 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 APOBEC2Q9Y235 224 aaKnown RBP16.96■□□□□ 0.31
CCDC78-201ENST00000293889 PCDHGA1Q9Y5H4 931 aa16.96■□□□□ 0.31
CCDC78-201ENST00000293889 P2RX6O15547 441 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 NDUFS4O43181 175 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 CTSBP07858 339 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 PTX3P26022 381 aaPredicted RBP16.96■□□□□ 0.3
CCDC78-201ENST00000293889 VSX2P58304 361 aaPredicted RBP16.96■□□□□ 0.3
CCDC78-201ENST00000293889 ZFP36L1Q07352 338 aaKnown RBP16.96■□□□□ 0.3
CCDC78-201ENST00000293889 NR6A1Q15406 480 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 TAF11Q15544 211 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 PHF19Q5T6S3 580 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 NXNQ6DKJ4 435 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 DHRS13Q6UX07 377 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 LARP4Q71RC2 724 aaKnown RBP eCLIP16.96■□□□□ 0.3
CCDC78-201ENST00000293889 ACTRT2Q8TDY3 377 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 SLC13A3Q8WWT9 602 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 STON2Q8WXE9 905 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 RERGQ96A58 199 aaPredicted RBP16.96■□□□□ 0.3
CCDC78-201ENST00000293889 CMTM7Q96FZ5 175 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 AICDAQ9GZX7 198 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 TCF7L2Q9NQB0 619 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 VPS29Q9UBQ0 182 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 TAGLN3Q9UI15 199 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 PLCL2Q9UPR0 1127 aa16.96■□□□□ 0.3
CCDC78-201ENST00000293889 LSM1O15116 133 aaKnown RBP16.95■□□□□ 0.3
CCDC78-201ENST00000293889 VPS4BO75351 444 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 ENTPD5O75356 428 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 FOLR1P15328 257 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 PTDSS1P48651 473 aaKnown RBP16.95■□□□□ 0.3
CCDC78-201ENST00000293889 PDX1P52945 283 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 CLDN6P56747 220 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 INSM1Q01101 510 aaPredicted RBP16.95■□□□□ 0.3
CCDC78-201ENST00000293889 HYAL2Q12891 473 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 TUBB3Q13509 450 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 LSM12Q3MHD2 195 aaKnown RBP16.95■□□□□ 0.3
CCDC78-201ENST00000293889 DEPDC1Q5TB30 811 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 RBM44Q6ZP01 1051 aaKnown RBP16.95■□□□□ 0.3
CCDC78-201ENST00000293889 ACAD11Q709F0 780 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 NT5CQ8TCD5 201 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 RILPQ96NA2 401 aa16.95■□□□□ 0.3
CCDC78-201ENST00000293889 F2RL3Q96RI0 385 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms