RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Olfr315Q8VFG7 309 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr807Q8VGI9 311 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr575Q8VH16 318 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Asb17Q8VHP9 295 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Tmem98Q91X86 226 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 BollQ924M5 281 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 MINDY3Q9CV28 444 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Twist2Q9D030 160 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Dnase1l1Q9D7J6 314 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Sgk2Q9QZS5 367 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Col11a1Q61245 1804 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Igkv5-43A0A0B4J1J2 115 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gm7682A0A0J9YUM1 481 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pramef25A2ASI9 494 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr1306A2BFL7 312 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Pabpc4lG5E8X2 370 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Wsb2O54929 404 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Gas2P11862 314 aaKnown RBP9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PfklP12382 780 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Aup1P70295 410 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Scrn3Q3TMH2 418 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Hesx1Q61658 185 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Il1rapQ61730 570 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Phf24Q80TL4 400 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Bend7Q8BSV3 434 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc41a2Q8BYR8 573 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Znf322Q8BZ89 410 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Slc5a11Q8K0E3 673 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Bloc1s5Q8R015 185 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr342Q8VGK7 312 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Nphs2Q91X05 385 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Mapk8Q91Y86 384 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Ms4a10Q99N03 267 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 PlgrktQ9D3P8 147 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Olfr630Q9EQQ7 319 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Fezf2Q9ESP5 455 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Acss2Q9QXG4 701 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 Nrg4Q9WTX4 115 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 ThadaA8C756 1938 aa9.4□□□□□ -0.9
Pcdh1-201ENSMUST00000057185 CtcflA2APF3 636 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zfp973A2BE20 318 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atp6ap1lD3Z5W0 336 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gml2G5E8L7 176 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm21800J3QMJ9 180 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm5724L7N264 670 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MaffO54791 156 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tnfaip1O70479 316 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Kcnj12P52187 427 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fbxo40P62932 710 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ap2m1P84091 435 aaKnown RBP9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Lmf1Q3U3R4 574 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Alg10bQ3UGP8 474 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm5460Q3UQ97 254 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Foxr1Q3UTB7 268 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 OmpQ64288 163 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ints6Q6PCM2 883 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Oog2Q7TPX8 476 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Adamtsl4Q80T21 1036 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Sumf2Q8BPG6 308 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Tmem125Q8CHQ6 216 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rbms2Q8VC70 383 aaKnown RBP9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ptov1Q91VU8 416 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ppp1r16aQ923M0 524 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Psat1Q99K85 370 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Art4Q9CRA0 300 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Plscr1Q9JJ00 328 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Hacl1Q9QXE0 581 aa9.4□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gm5565A0A0G2JGB2 317 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn1r31L7N2F1 303 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 SrgnP13609 152 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Atp1b2P14231 290 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Klrb1cP27814 223 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ccr7P47774 378 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nr4a2Q06219 598 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Zmym5Q3U2E2 627 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Q3UST5 385 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 ClpbQ60649 677 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Il20raQ6PHB0 546 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 1700001K19RikQ80ZT1 219 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nup107Q8BH74 926 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ctdsp2Q8BX07 270 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ccdc17Q8CE13 565 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Olfr791Q8VGJ0 312 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Nipal2Q91WC7 383 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Ankrd54Q91WK7 299 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rbm47Q91WT8 590 aaKnown RBP9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 TympQ99N42 471 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Smurf1Q9CUN6 731 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Vmn1r29Q9EQ41 303 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gabrr3B2RXA8 464 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Rem1O35929 297 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gpr25P0C5I1 358 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Slc7a2P18581 657 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Itgb7P26011 806 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Acvr1P37172 509 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Pax7P47239 503 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Gbx1P82976 418 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Scgb1a1Q06318 96 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 MocosQ14CH1 862 aa9.39□□□□□ -0.91
Pcdh1-201ENSMUST00000057185 Fam105aQ3TVP5 353 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms