RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 SrcP05480 541 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 CutalQ9D1U5 156 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fam122cQ9D5J5 180 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ighg3A0A1Y7VJN6 399 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rhox4fQ2MDF8 205 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rhox4cQ2MDG1 205 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Mier2Q3U3N0 541 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Elmod3Q91YP6 381 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 OptcQ920A0 328 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Uck2Q99PM9 261 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rpl14Q9CR57 217 aaKnown RBP16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Rhox4aQ9D3I8 205 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vmn2r21K7N6Y7 853 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vmn2r20L7N2B1 853 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Vmn2r52L7N2B2 852 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 ArvcfP98203 962 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cntn2Q61330 1040 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Trmt2bQ8BQJ6 493 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zmiz2Q8CIE2 920 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr1499Q8VG65 314 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Diras1Q91Z61 198 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Glod4Q9CPV4 298 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 3110001I22RikQ9CZ70 312 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 BckdkO55028 412 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 UgcgO88693 394 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Actr3bQ641P0 418 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Fndc9Q8BJN4 226 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc15a5Q8CBB2 566 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr692Q8VF03 329 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Nmnat1Q9EPA7 285 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 TsnaxQ9QZE7 290 aaKnown RBP16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ighv11-2A0A075B5R8 117 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp282E9PVC2 666 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 ChkaO54804 453 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 NogP97466 232 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Dsg1cQ7TSF0 911 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr955Q9EQ97 314 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cyp21P03940 487 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tas2r110Q7M712 333 aa16.12■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm8127E9Q0P0 100 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Inpp5aE9QAS7 422 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ap5b1Q3TAP4 876 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp759Q7M6X3 721 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 NelfaQ8BG30 530 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Cd209eQ91ZW7 208 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 ProzQ9CQW3 399 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 H2-BlV9GXR0 257 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tomm5B1AXP6 51 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr741L7N1Y5 311 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr857Q7TRF7 309 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Pcbd2Q9CZL5 136 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 PtgfrnQ9WV91 879 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Aldoart1A6ZI46 419 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ctla2aP12399 137 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr533Q7TRT7 320 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ugt2a3Q8BWQ1 534 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Paip1Q8VE62 400 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Barhl2Q8VIB5 384 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 TmlheQ91ZE0 421 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ing5Q9D8Y8 240 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Bag6Q9Z1R2 1154 aaKnown RBP16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm5788A0A1Y7VK80 144 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Hbb-bh2B2RVB7 147 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Dcpp2E9PYC2 171 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Dcpp1L7N1X9 171 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ercc1P07903 298 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 St3gal1P54751 337 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Q3UUX7 111 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 TtpaQ8BWP5 278 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Adnp2Q8CHC8 1165 aaKnown RBP16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp81B8JJZ7 531 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Gm266A6H634 200 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr6P34986 316 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Pon3Q62087 354 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr570Q8VH12 312 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Camk1gQ91VB2 477 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ripply3Q924S9 152 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Ndufs4Q9CXZ1 175 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Trmt5Q9D0C4 501 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Asb12Q9D738 308 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Sema6bO54951 886 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Hoxa11P31311 313 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 SbplQ3TUY3 232 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 LchnQ3UHG7 455 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc46a2Q8CA03 479 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Olfr1310Q8VF85 312 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc8b1Q925Q3 585 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tbc1d15Q9CXF4 671 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 PrebQ9WUQ2 417 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Kcnq2Q9Z351 759 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 ChadlE9Q7T7 748 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 MafbP54841 323 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Slc2a9Q3T9X0 538 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 6430531B16RikQ3V2J1 307 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Zfp866Q6PGD2 520 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Proser3Q7TSA6 634 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Creb3l2Q8BH52 521 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Flrt2Q8BLU0 660 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Trnt1Q8K1J6 434 aa16.11■□□□□ 0.17
Ccdc88a-201ENSMUST00000040182 Tmem203Q8R235 136 aa16.11■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 19.9 ms