RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Abcg1Q64343 666 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Awat2Q6E1M8 333 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Zzz3Q6KAQ7 910 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Fgl1Q71KU9 314 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ppp2r1bQ7TNP2 601 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr384Q7TRX8 312 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Chst2Q80WV3 530 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 ReltQ8BX43 436 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Angptl7Q8R1Q3 337 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Vps4aQ8VEJ9 437 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr357Q8VFP4 308 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Msh4Q99MT2 958 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Desi1Q9CQT7 168 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 DlstQ9D2G2 454 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Stx11Q9D3G5 287 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ing1Q9QXV3 279 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 B4galt6Q9WVK5 382 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Bag6Q9Z1R2 1154 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 TprF6ZDS4 2431 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Spats1A2RRY8 269 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr1215A3KGY3 312 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm4969D3YZT1 566 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Btnl2O70355 454 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rc3h2P0C090 1187 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 TpbpaP13438 124 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Atp1b2P14231 290 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Adrb1P34971 466 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kcna7Q17ST2 489 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Treml2Q2LA85 329 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 SbplQ3TUY3 232 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ms4a15Q3UPL6 245 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gpr149Q3UVY1 732 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Golga7Q91W53 137 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ptgr1Q91YR9 329 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Spred2Q924S7 410 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Use1Q9CQ56 270 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rpl4Q9D8E6 419 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Smim23Q9DAL0 136 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 TrehQ9JLT2 576 aa10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Clic1Q9Z1Q5 241 aaKnown RBP10.53□□□□□ -0.72
Msh3-201ENSMUST00000022220 Lcn11A2BHR2 178 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm19965J3QNY8 723 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Mtnd2P03893 345 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 CtsdP18242 410 aaKnown RBP10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gpx3P46412 226 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 MamstrQ0ZCJ7 421 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gm5460Q3UQ97 254 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 A630001G21RikQ3UTB2 229 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Scn2bQ56A07 215 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rnf215Q5SPX3 379 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Pkp4Q68FH0 1190 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Rpp38Q80UU2 280 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Hs3st5Q8BSL4 346 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Kcnk10Q8BUW1 535 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dlgap5Q8K4R9 808 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dhcr24Q8VCH6 516 aaKnown RBP10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr1310Q8VF85 312 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ssr2Q9CPW5 183 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Ift43Q9DA69 206 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Il1rl2Q9ERS7 574 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Gmeb1Q9JL60 562 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Dpp6Q9Z218 804 aa10.52□□□□□ -0.72
Msh3-201ENSMUST00000022220 Olfr1200A2ATJ4 336 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr521E9Q519 321 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gbx2P48031 348 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rack1P68040 317 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Emx1Q04742 257 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Xrra1Q3U3V8 786 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rassf5Q5EBH1 413 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cxcl17Q5UW37 119 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Wnt8aQ64527 354 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Q6P1I3 445 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ldoc1Q7TPY9 151 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Chrnb3Q8BMN3 464 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cox10Q8CFY5 443 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Polr1eQ8K202 482 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rbms2Q8VC70 383 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Cxxc5Q91WA4 317 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Socs4Q91ZA6 436 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Hspa14Q99M31 509 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gkn2Q9CQS6 184 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm16286Q9CQX6 220 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pinx1Q9CZX5 332 aaKnown RBP10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 GrifinQ9D1U0 144 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rnase10Q9D5A9 208 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Pdzk1Q9JIL4 519 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Sars2Q9JJL8 518 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Ly75Q60767 1723 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Skint11A7XV14 364 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Rdh8D3Z6W3 317 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Olfr891E9Q843 316 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Gm6502L7N456 481 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 H2-Q8P14430 326 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Csn1s1P19228 313 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Clk1P22518 483 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 CatP24270 527 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 Kcnj9P48543 393 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 H2-Q6P79568 326 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 S100a13P97352 98 aa10.52□□□□□ -0.73
Msh3-201ENSMUST00000022220 ptchd1Q14B62 888 aa10.52□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms