RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRL1	YOR247W	DOT1	Q04089	582 aa	Known RBP	4.17	□□□□□ -1.74
SRL1	YOR247W	DUS3	Q06053	668 aa	Known RBP	4.17	□□□□□ -1.74
SRL1	YOR247W	HRK1	Q08732	759 aa	Known RBP	4.17	□□□□□ -1.74
SRL1	YOR247W	SPO21	Q12411	609 aa		4.17	□□□□□ -1.74
SRL1	YOR247W	ADR1	P07248	1323 aa		4.17	□□□□□ -1.74
SRL1	YOR247W	THS1	P04801	734 aa	Known RBP	4.16	□□□□□ -1.74
SRL1	YOR247W	RPL8A	P17076	256 aa	Known RBP	4.16	□□□□□ -1.74
SRL1	YOR247W	KIP1	P28742	1111 aa		4.16	□□□□□ -1.74
SRL1	YOR247W	YBR284W	P38150	797 aa		4.16	□□□□□ -1.74
SRL1	YOR247W	PNT1	P38969	423 aa		4.16	□□□□□ -1.74
SRL1	YOR247W	SIT1	P39980	628 aa		4.16	□□□□□ -1.74
SRL1	YOR247W	RPN3	P40016	523 aa	Known RBP	4.16	□□□□□ -1.74
SRL1	YOR247W	UBP6	P43593	499 aa	Known RBP	4.16	□□□□□ -1.74
SRL1	YOR247W	HLJ1	P48353	224 aa		4.16	□□□□□ -1.74
SRL1	YOR247W	YNR029C	P53729	429 aa	Known RBP	4.16	□□□□□ -1.74
SRL1	YOR247W	YLR257W	Q06146	321 aa	Known RBP	4.16	□□□□□ -1.74
SRL1	YOR247W	RPL11A	P0C0W9	174 aa	Known RBP	4.15	□□□□□ -1.75
SRL1	YOR247W	YER152C	P10356	443 aa		4.15	□□□□□ -1.75
SRL1	YOR247W	SMY2	P32909	740 aa	Known RBP	4.15	□□□□□ -1.75
SRL1	YOR247W	PGM1	P33401	570 aa	Known RBP	4.15	□□□□□ -1.75
SRL1	YOR247W	PET10	P36139	283 aa		4.15	□□□□□ -1.75
SRL1	YOR247W	YEN1	P40028	759 aa		4.15	□□□□□ -1.75
SRL1	YOR247W	RTS3	P53289	263 aa		4.15	□□□□□ -1.75
SRL1	YOR247W	TFB2	Q02939	513 aa		4.15	□□□□□ -1.75
SRL1	YOR247W	YPR071W	Q12346	211 aa		4.15	□□□□□ -1.75
SRL1	YOR247W	RPL11B	Q3E757	174 aa	Predicted RBP	4.15	□□□□□ -1.75
SRL1	YOR247W	KAE1	P36132	386 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	YRO2	P38079	344 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	SAF1	P38352	637 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	DSS1	P39112	969 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	NOP2	P40991	618 aa	Known RBP	4.14	□□□□□ -1.75
SRL1	YOR247W	PMT3	P47190	753 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	HOS3	Q02959	697 aa	Known RBP	4.14	□□□□□ -1.75
SRL1	YOR247W	LCD1	Q04377	747 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	ACM1	Q08981	209 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	MDM12	Q92328	271 aa		4.14	□□□□□ -1.75
SRL1	YOR247W	TOP3	P13099	656 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	CHS2	P14180	963 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	RAD53	P22216	821 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	GPT2	P36148	743 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	SAH1	P39954	449 aa	Known RBP	4.13	□□□□□ -1.75
SRL1	YOR247W	ALG2	P43636	503 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	YJR008W	P47085	338 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	CCM1	P48237	864 aa	Predicted RBP	4.13	□□□□□ -1.75
SRL1	YOR247W	ZDS1	P50111	915 aa	Known RBP	4.13	□□□□□ -1.75
SRL1	YOR247W	NCE103	P53615	221 aa		4.13	□□□□□ -1.75
SRL1	YOR247W	TOP1	P04786	769 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
SRL1	YOR247W	MSD1	P15179	658 aa	Known RBP	4.12	□□□□□ -1.75
SRL1	YOR247W	DBP2	P24783	546 aa	Known RBP	4.12	□□□□□ -1.75
SRL1	YOR247W	MRC1	P25588	1096 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	AKR1	P39010	764 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	GPB2	P39717	880 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	MXR1	P40029	184 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	YGR237C	P50089	785 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	MAL11	P53048	616 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	TNA1	P53322	534 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	YNL193W	P53870	558 aa		4.12	□□□□□ -1.75
SRL1	YOR247W	COQ4	O13525	335 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	RPS4A	P0CX35	261 aa	Known RBP	4.11	□□□□□ -1.75
SRL1	YOR247W	RPS4B	P0CX36	261 aa	Known RBP	4.11	□□□□□ -1.75
SRL1	YOR247W	PRO1	P32264	428 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	CDC12	P32468	407 aa	Known RBP	4.11	□□□□□ -1.75
SRL1	YOR247W	YSC84	P32793	468 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	REC104	P33323	182 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	UGA2	P38067	497 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	GRX7	P38068	203 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	YJL045W	P47052	634 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	DAM1	P53267	343 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	SDA1	P53313	767 aa	Known RBP	4.11	□□□□□ -1.75
SRL1	YOR247W	TPP1	Q03796	238 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	ATG13	Q06628	738 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
SRL1	YOR247W	PUS7	Q08647	676 aa	Known RBP	4.11	□□□□□ -1.75
SRL1	YOR247W	YLL058W	Q12198	575 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	NUP145	P49687	1317 aa		4.11	□□□□□ -1.75
SRL1	YOR247W	VBA3	P25594	458 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	MAC1	P35192	417 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	YKR078W	P36158	585 aa	Known RBP	4.1	□□□□□ -1.75
SRL1	YOR247W	CCZ1	P38273	704 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	PAF1	P38351	445 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	NIT3	P49954	291 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	ALT1	P52893	592 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	THI73	Q07904	523 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	MED7	Q08278	222 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	YLR122C	Q12312	125 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	NSI1	Q12457	570 aa		4.1	□□□□□ -1.75
SRL1	YOR247W	MSB1	P21339	1137 aa	Known RBP	4.09	□□□□□ -1.75
SRL1	YOR247W	SLA2	P33338	968 aa		4.09	□□□□□ -1.75
SRL1	YOR247W	YEL1	P34225	687 aa		4.09	□□□□□ -1.75
SRL1	YOR247W	NMD3	P38861	518 aa	Known RBP	4.09	□□□□□ -1.75
SRL1	YOR247W	NBA1	Q08229	501 aa	Known RBP	4.09	□□□□□ -1.75
SRL1	YOR247W	YOR059C	Q08448	450 aa	Known RBP	4.09	□□□□□ -1.75
SRL1	YOR247W	MEF1	P25039	761 aa		4.08	□□□□□ -1.76
SRL1	YOR247W	NAM7	P30771	971 aa	Known RBP	4.08	□□□□□ -1.76
SRL1	YOR247W	SPC29	P33419	253 aa		4.08	□□□□□ -1.76
SRL1	YOR247W	OMA1	P36163	345 aa		4.08	□□□□□ -1.76
SRL1	YOR247W	PIK1	P39104	1066 aa		4.08	□□□□□ -1.76
SRL1	YOR247W	TOK1	P40310	691 aa		4.08	□□□□□ -1.76
SRL1	YOR247W	MMM1	P41800	426 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms