RNA–Protein interactions for RNA: YOR036W

PEP12, Transcript of Target membrane receptor (t-SNARE), yeastyeast

Gene PEP12, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP12YOR036W HFM1P51979 1187 aa4.13□□□□□ -1.75
PEP12YOR036W EXG2P52911 562 aa4.13□□□□□ -1.75
PEP12YOR036W MCD1Q12158 566 aa4.13□□□□□ -1.75
PEP12YOR036W HRR25P29295 494 aaKnown RBP4.12□□□□□ -1.75
PEP12YOR036W UGA2P38067 497 aa4.12□□□□□ -1.75
PEP12YOR036W MRPS18P42847 217 aa4.12□□□□□ -1.75
PEP12YOR036W THI12P42883 340 aa4.12□□□□□ -1.75
PEP12YOR036W THI5P43534 340 aa4.12□□□□□ -1.75
PEP12YOR036W THI11P47183 340 aa4.12□□□□□ -1.75
PEP12YOR036W YGR122WP53272 402 aa4.12□□□□□ -1.75
PEP12YOR036W THI13Q07748 340 aa4.12□□□□□ -1.75
PEP12YOR036W HIS5P07172 385 aa4.11□□□□□ -1.75
PEP12YOR036W DBP2P24783 546 aaKnown RBP4.11□□□□□ -1.75
PEP12YOR036W MRL1Q06815 381 aa4.11□□□□□ -1.75
PEP12YOR036W RPL11AP0C0W9 174 aaKnown RBP4.1□□□□□ -1.75
PEP12YOR036W PFK1P16861 987 aaKnown RBP4.1□□□□□ -1.75
PEP12YOR036W POA1P38218 177 aa4.1□□□□□ -1.75
PEP12YOR036W STM1P39015 273 aaKnown RBP4.1□□□□□ -1.75
PEP12YOR036W RRT14P40470 206 aa4.1□□□□□ -1.75
PEP12YOR036W CHA4P43634 648 aa4.1□□□□□ -1.75
PEP12YOR036W XYL2Q07993 356 aa4.1□□□□□ -1.75
PEP12YOR036W AIM39Q08223 395 aa4.1□□□□□ -1.75
PEP12YOR036W ACM1Q08981 209 aa4.1□□□□□ -1.75
PEP12YOR036W KCS1Q12494 1050 aa4.1□□□□□ -1.75
PEP12YOR036W RPL11BQ3E757 174 aaPredicted RBP4.1□□□□□ -1.75
PEP12YOR036W RAD2P07276 1031 aa4.09□□□□□ -1.75
PEP12YOR036W SLA2P33338 968 aa4.09□□□□□ -1.75
PEP12YOR036W ZRG8P40021 1076 aa4.09□□□□□ -1.75
PEP12YOR036W IOC3P43596 787 aa4.09□□□□□ -1.75
PEP12YOR036W LAS17Q12446 633 aa4.09□□□□□ -1.75
PEP12YOR036W GCR1P07261 785 aa4.08□□□□□ -1.76
PEP12YOR036W UBA2P52488 636 aa4.08□□□□□ -1.76
PEP12YOR036W ENA1P13587 1091 aa4.07□□□□□ -1.76
PEP12YOR036W CYC8P14922 966 aa4.07□□□□□ -1.76
PEP12YOR036W ENA2Q01896 1091 aa4.07□□□□□ -1.76
PEP12YOR036W TIF35Q04067 274 aaKnown RBP4.07□□□□□ -1.76
PEP12YOR036W ENA5Q12691 1091 aa4.07□□□□□ -1.76
PEP12YOR036W GEM1P39722 662 aa4.06□□□□□ -1.76
PEP12YOR036W BUL1P48524 976 aa4.06□□□□□ -1.76
PEP12YOR036W MTC3P53077 123 aa4.06□□□□□ -1.76
PEP12YOR036W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
PEP12YOR036W GNT1Q12096 491 aa4.06□□□□□ -1.76
PEP12YOR036W SLD2P34252 453 aa4.05□□□□□ -1.76
PEP12YOR036W RER2P35196 286 aa4.05□□□□□ -1.76
PEP12YOR036W MCM7P38132 845 aa4.05□□□□□ -1.76
PEP12YOR036W RPS26AP39938 119 aaKnown RBP4.05□□□□□ -1.76
PEP12YOR036W RPS26BP39939 119 aaKnown RBP4.05□□□□□ -1.76
PEP12YOR036W YLR040CQ07988 224 aa4.05□□□□□ -1.76
PEP12YOR036W PNT1P38969 423 aa4.04□□□□□ -1.76
PEP12YOR036W ATF1P40353 525 aa4.04□□□□□ -1.76
PEP12YOR036W SEN54Q02825 467 aaPredicted RBP4.04□□□□□ -1.76
PEP12YOR036W YAP1801P38856 637 aa4.03□□□□□ -1.76
PEP12YOR036W IPL1P38991 367 aa4.03□□□□□ -1.76
PEP12YOR036W CDA1Q06702 301 aa4.03□□□□□ -1.76
PEP12YOR036W YOL073CQ08232 322 aa4.03□□□□□ -1.76
PEP12YOR036W NPC2Q12408 173 aa4.03□□□□□ -1.76
PEP12YOR036W SPE1P08432 466 aa4.02□□□□□ -1.77
PEP12YOR036W EFT1P32324 842 aaKnown RBP4.02□□□□□ -1.77
PEP12YOR036W QRI1P43123 477 aaKnown RBP4.02□□□□□ -1.77
PEP12YOR036W YGR012WP53206 393 aa4.02□□□□□ -1.77
PEP12YOR036W TMN2Q04562 672 aa4.02□□□□□ -1.77
PEP12YOR036W ENB1Q08299 606 aa4.02□□□□□ -1.77
PEP12YOR036W THS1P04801 734 aaKnown RBP4.01□□□□□ -1.77
PEP12YOR036W MCM2P29469 868 aa4.01□□□□□ -1.77
PEP12YOR036W NCS6P53088 359 aa4.01□□□□□ -1.77
PEP12YOR036W BDF2Q07442 638 aa4.01□□□□□ -1.77
PEP12YOR036W KAR4P25583 335 aa4□□□□□ -1.77
PEP12YOR036W SUL1P38359 859 aa4□□□□□ -1.77
PEP12YOR036W LGE1Q02796 332 aaKnown RBP4□□□□□ -1.77
PEP12YOR036W SPP382Q06411 708 aaPredicted RBP4□□□□□ -1.77
PEP12YOR036W OSW2Q12202 724 aa4□□□□□ -1.77
PEP12YOR036W RPP2AP05319 106 aaKnown RBP3.99□□□□□ -1.77
PEP12YOR036W HEM3P28789 327 aa3.99□□□□□ -1.77
PEP12YOR036W SEC20P28791 383 aa3.99□□□□□ -1.77
PEP12YOR036W SRP101P32916 621 aa3.99□□□□□ -1.77
PEP12YOR036W YKL151CP36059 337 aa3.99□□□□□ -1.77
PEP12YOR036W STB4P50104 949 aa3.99□□□□□ -1.77
PEP12YOR036W WHI4Q07655 649 aaKnown RBP3.99□□□□□ -1.77
PEP12YOR036W YPL066WQ12194 479 aa3.99□□□□□ -1.77
PEP12YOR036W URM1P40554 99 aaPredicted RBP3.98□□□□□ -1.77
PEP12YOR036W SNM1P40993 198 aa3.98□□□□□ -1.77
PEP12YOR036W MCH5Q08777 521 aa3.98□□□□□ -1.77
PEP12YOR036W ECM21P38167 1117 aaKnown RBP3.97□□□□□ -1.77
PEP12YOR036W YMR206WQ03695 313 aa3.97□□□□□ -1.77
PEP12YOR036W SPR28Q04921 423 aa3.97□□□□□ -1.77
PEP12YOR036W HRQ1Q05549 1077 aa3.97□□□□□ -1.77
PEP12YOR036W IRC10Q08118 586 aa3.97□□□□□ -1.77
PEP12YOR036W MDM38Q08179 573 aa3.97□□□□□ -1.77
PEP12YOR036W RAD27P26793 382 aa3.96□□□□□ -1.78
PEP12YOR036W CUE2P36075 443 aaKnown RBP3.96□□□□□ -1.78
PEP12YOR036W CCC2P38995 1004 aa3.96□□□□□ -1.78
PEP12YOR036W STU2P46675 888 aa3.96□□□□□ -1.78
PEP12YOR036W SNU71P53207 620 aaKnown RBP3.96□□□□□ -1.78
PEP12YOR036W RTT10Q08924 1013 aa3.96□□□□□ -1.78
PEP12YOR036W ERG4P25340 473 aa3.95□□□□□ -1.78
PEP12YOR036W ASF1P32447 279 aa3.95□□□□□ -1.78
PEP12YOR036W MOT2P34909 587 aaKnown RBP3.95□□□□□ -1.78
PEP12YOR036W KTR4P38131 464 aa3.95□□□□□ -1.78
PEP12YOR036W GIC1P38785 314 aa3.95□□□□□ -1.78
PEP12YOR036W MUK1Q02866 612 aa3.95□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms