RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	MRP7	P12687	371 aa		7.24	□□□□□ -1.25
CSL4	YNL232W	AFG3	P39925	761 aa		7.24	□□□□□ -1.25
CSL4	YNL232W	YIL165C	P40446	119 aa		7.24	□□□□□ -1.25
CSL4	YNL232W	PPT1	P53043	513 aa		7.24	□□□□□ -1.25
CSL4	YNL232W	FMP30	Q02883	468 aa		7.24	□□□□□ -1.25
CSL4	YNL232W	MSN1	P22148	382 aa		7.23	□□□□□ -1.25
CSL4	YNL232W	BRE5	P53741	515 aa	Known RBP	7.23	□□□□□ -1.25
CSL4	YNL232W	PUF6	Q04373	656 aa	Known RBP	7.23	□□□□□ -1.25
CSL4	YNL232W	THI22	Q06490	572 aa		7.23	□□□□□ -1.25
CSL4	YNL232W	RTT109	Q07794	436 aa		7.23	□□□□□ -1.25
CSL4	YNL232W	SRS2	P12954	1174 aa		7.22	□□□□□ -1.25
CSL4	YNL232W	YHR131C	P38835	850 aa		7.22	□□□□□ -1.25
CSL4	YNL232W	VAB2	P40003	282 aa		7.22	□□□□□ -1.25
CSL4	YNL232W	LYS14	P40971	790 aa		7.22	□□□□□ -1.25
CSL4	YNL232W	IOC4	Q04213	475 aa		7.22	□□□□□ -1.25
CSL4	YNL232W	RSC2	Q06488	889 aa		7.22	□□□□□ -1.25
CSL4	YNL232W	MDM20	Q12387	796 aa	Known RBP	7.22	□□□□□ -1.25
CSL4	YNL232W	TY1A-NL1	Q12391	440 aa	Known RBP	7.22	□□□□□ -1.25
CSL4	YNL232W	TUB2	P02557	457 aa	Known RBP	7.21	□□□□□ -1.26
CSL4	YNL232W	SNF3	P10870	884 aa		7.21	□□□□□ -1.26
CSL4	YNL232W	RSC6	P25632	483 aa		7.21	□□□□□ -1.26
CSL4	YNL232W	COQ2	P32378	372 aa		7.21	□□□□□ -1.26
CSL4	YNL232W	SRT1	Q03175	343 aa		7.21	□□□□□ -1.26
CSL4	YNL232W	YML083C	Q04526	418 aa		7.21	□□□□□ -1.26
CSL4	YNL232W	SNU66	Q12420	587 aa	Predicted RBP	7.21	□□□□□ -1.26
CSL4	YNL232W	TUS1	Q06412	1307 aa		7.21	□□□□□ -1.26
CSL4	YNL232W	YBL028C	P38202	106 aa		7.2	□□□□□ -1.26
CSL4	YNL232W	EMG1	Q06287	252 aa	Known RBP	7.2	□□□□□ -1.26
CSL4	YNL232W	YLR122C	Q12312	125 aa		7.2	□□□□□ -1.26
CSL4	YNL232W	TRP3	P00937	484 aa		7.19	□□□□□ -1.26
CSL4	YNL232W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.19	□□□□□ -1.26	not detected
CSL4	YNL232W	YKR073C	P36153	106 aa		7.19	□□□□□ -1.26
CSL4	YNL232W	MXR1	P40029	184 aa		7.19	□□□□□ -1.26
CSL4	YNL232W	YJR107W	P47145	328 aa		7.19	□□□□□ -1.26
CSL4	YNL232W	YGR122W	P53272	402 aa		7.19	□□□□□ -1.26
CSL4	YNL232W	TOR1	P35169	2470 aa		7.19	□□□□□ -1.26
CSL4	YNL232W	KAE1	P36132	386 aa		7.18	□□□□□ -1.26
CSL4	YNL232W	UBP12	P39538	1254 aa		7.18	□□□□□ -1.26
CSL4	YNL232W	SWC3	P31376	625 aa		7.17	□□□□□ -1.26
CSL4	YNL232W	BCS1	P32839	456 aa		7.17	□□□□□ -1.26
CSL4	YNL232W	KTR2	P33550	425 aa		7.17	□□□□□ -1.26
CSL4	YNL232W	PTK1	P36002	662 aa	Predicted RBP	7.17	□□□□□ -1.26
CSL4	YNL232W	GLO3	P38682	493 aa	Known RBP	7.17	□□□□□ -1.26
CSL4	YNL232W	INP51	P40559	946 aa	Known RBP	7.17	□□□□□ -1.26
CSL4	YNL232W	YIR042C	P40586	236 aa		7.17	□□□□□ -1.26
CSL4	YNL232W	MET7	Q08645	548 aa		7.17	□□□□□ -1.26
CSL4	YNL232W	PCL8	Q08966	492 aa		7.17	□□□□□ -1.26
CSL4	YNL232W	TOR2	P32600	2474 aa	Known RBP	7.16	□□□□□ -1.26
CSL4	YNL232W	NOP2	P40991	618 aa	Known RBP	7.16	□□□□□ -1.26
CSL4	YNL232W	DSE4	P53753	1117 aa		7.16	□□□□□ -1.26
CSL4	YNL232W	MED7	Q08278	222 aa		7.16	□□□□□ -1.26
CSL4	YNL232W	NOB1	Q08444	459 aa	Known RBP	7.16	□□□□□ -1.26
CSL4	YNL232W	FAB1	P34756	2278 aa		7.16	□□□□□ -1.26
CSL4	YNL232W	NAM7	P30771	971 aa	Known RBP	7.15	□□□□□ -1.26
CSL4	YNL232W	EUG1	P32474	517 aa		7.15	□□□□□ -1.26
CSL4	YNL232W	MDL2	P33311	773 aa		7.15	□□□□□ -1.26
CSL4	YNL232W	TFA2	P36145	328 aa		7.15	□□□□□ -1.26
CSL4	YNL232W	KSP1	P38691	1029 aa	Known RBP	7.15	□□□□□ -1.26
CSL4	YNL232W	HXT8	P40886	569 aa		7.15	□□□□□ -1.26
CSL4	YNL232W	INM2	Q05533	292 aa		7.15	□□□□□ -1.26
CSL4	YNL232W	UBX5	Q06682	500 aa		7.15	□□□□□ -1.26
CSL4	YNL232W	SAF1	P38352	637 aa		7.14	□□□□□ -1.27
CSL4	YNL232W	PAN5	P38787	379 aa		7.14	□□□□□ -1.27
CSL4	YNL232W	MPP10	P47083	593 aa	Known RBP	7.14	□□□□□ -1.27
CSL4	YNL232W	BIO5	P53744	561 aa	Known RBP	7.14	□□□□□ -1.27
CSL4	YNL232W	HEF3	P53978	1044 aa	Known RBP	7.14	□□□□□ -1.27
CSL4	YNL232W	SUB2	Q07478	446 aa	Known RBP	7.14	□□□□□ -1.27
CSL4	YNL232W	PER1	P25625	357 aa		7.13	□□□□□ -1.27
CSL4	YNL232W	BOI1	P38041	980 aa	Known RBP	7.13	□□□□□ -1.27
CSL4	YNL232W	AKR1	P39010	764 aa		7.13	□□□□□ -1.27
CSL4	YNL232W	RGD2	P43556	714 aa		7.13	□□□□□ -1.27
CSL4	YNL232W	YDL124W	Q07551	312 aa	Known RBP	7.13	□□□□□ -1.27
CSL4	YNL232W	REC8	Q12188	680 aa		7.13	□□□□□ -1.27
CSL4	YNL232W	KRS1	P15180	591 aa	Known RBP	7.12	□□□□□ -1.27
CSL4	YNL232W	VMA2	P16140	517 aa	Known RBP	7.12	□□□□□ -1.27
CSL4	YNL232W	RAD24	P32641	659 aa		7.12	□□□□□ -1.27
CSL4	YNL232W	AIM46	P38885	310 aa		7.12	□□□□□ -1.27
CSL4	YNL232W	MSH4	P40965	878 aa	Predicted RBP	7.12	□□□□□ -1.27
CSL4	YNL232W	SNU71	P53207	620 aa	Known RBP	7.12	□□□□□ -1.27
CSL4	YNL232W	PNP1	Q05788	311 aa		7.12	□□□□□ -1.27
CSL4	YNL232W	SOG2	Q08817	791 aa		7.12	□□□□□ -1.27
CSL4	YNL232W	SEC18	P18759	758 aa	Known RBP	7.11	□□□□□ -1.27
CSL4	YNL232W	GRS1	P38088	690 aa	Known RBP	7.11	□□□□□ -1.27
CSL4	YNL232W	SUT1	P53032	299 aa	Known RBP	7.11	□□□□□ -1.27
CSL4	YNL232W	GUP1	P53154	560 aa		7.11	□□□□□ -1.27
CSL4	YNL232W	YGR130C	P53278	816 aa		7.11	□□□□□ -1.27
CSL4	YNL232W	DUS4	Q06063	367 aa		7.11	□□□□□ -1.27
CSL4	YNL232W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	7.11	□□□□□ -1.27	not detected
CSL4	YNL232W	CHS2	P14180	963 aa		7.1	□□□□□ -1.27
CSL4	YNL232W	RGT1	P32862	1170 aa		7.1	□□□□□ -1.27
CSL4	YNL232W	YDR524C-B	Q3E6R4	66 aa		7.1	□□□□□ -1.27
CSL4	YNL232W	MOT1	P32333	1867 aa		7.1	□□□□□ -1.27
CSL4	YNL232W	MYO1	P08964	1928 aa		7.09	□□□□□ -1.27
CSL4	YNL232W	FUS1	P11710	512 aa		7.09	□□□□□ -1.27
CSL4	YNL232W	GPB2	P39717	880 aa		7.09	□□□□□ -1.27
CSL4	YNL232W	TIF4631	P39935	952 aa	Known RBP	7.09	□□□□□ -1.27
CSL4	YNL232W	YML037C	Q03703	340 aa		7.09	□□□□□ -1.27
CSL4	YNL232W	NOP8	Q08287	484 aa	Predicted RBP	7.09	□□□□□ -1.27
CSL4	YNL232W	LAP2	Q10740	671 aa		7.09	□□□□□ -1.27
CSL4	YNL232W	APC11	Q12157	165 aa		7.09	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms