RNA–Protein interactions for RNA: YLL016W

SDC25, Transcript of Non-essential Ras guanine nucleotide exchange factor (GEF), yeastyeast

Gene SDC25, Length 3,147 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDC25YLL016W MCM7P38132 845 aa2.96□□□□□ -1.94
SDC25YLL016W MBP1P39678 833 aa2.96□□□□□ -1.94
SDC25YLL016W SAH1P39954 449 aaKnown RBP2.96□□□□□ -1.94
SDC25YLL016W PIP2P52960 996 aa2.96□□□□□ -1.94
SDC25YLL016W PIF1P07271 859 aa2.96□□□□□ -1.94
SDC25YLL016W PRP5P21372 849 aaPredicted RBP2.96□□□□□ -1.94
SDC25YLL016W TFC3P34111 1160 aa2.96□□□□□ -1.94
SDC25YLL016W IES5P40060 125 aa2.96□□□□□ -1.94
SDC25YLL016W YGL176CP46945 554 aa2.96□□□□□ -1.94
SDC25YLL016W NPL3Q01560 414 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SDC25YLL016W FRK1Q03002 865 aaPredicted RBP2.96□□□□□ -1.94
SDC25YLL016W HIF1Q12373 385 aa2.96□□□□□ -1.94
SDC25YLL016W MPH2P0CD99 609 aa2.95□□□□□ -1.94
SDC25YLL016W MSH3P25336 1018 aa2.95□□□□□ -1.94
SDC25YLL016W TOA1P32773 286 aa2.95□□□□□ -1.94
SDC25YLL016W TRZ1P36159 838 aaPredicted RBP2.95□□□□□ -1.94
SDC25YLL016W TAF1P46677 1066 aa2.95□□□□□ -1.94
SDC25YLL016W URB1P34241 1764 aaKnown RBP2.95□□□□□ -1.94
SDC25YLL016W COBP00163 385 aa2.95□□□□□ -1.94
SDC25YLL016W RAD18P10862 487 aa2.95□□□□□ -1.94
SDC25YLL016W PTP2P29461 750 aa2.95□□□□□ -1.94
SDC25YLL016W PYC2P32327 1180 aaKnown RBP2.95□□□□□ -1.94
SDC25YLL016W PRP19P32523 503 aaKnown RBP2.95□□□□□ -1.94
SDC25YLL016W DOM34P33309 386 aa2.95□□□□□ -1.94
SDC25YLL016W PIN4P34217 668 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SDC25YLL016W PAN5P38787 379 aa2.95□□□□□ -1.94
SDC25YLL016W YGL140CP53120 1219 aa2.95□□□□□ -1.94
SDC25YLL016W CTR9P89105 1077 aa2.95□□□□□ -1.94
SDC25YLL016W ROD1Q02805 837 aa2.95□□□□□ -1.94
SDC25YLL016W PHR1P05066 565 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SDC25YLL016W TOP3P13099 656 aa2.95□□□□□ -1.94
SDC25YLL016W NIC96P34077 839 aa2.95□□□□□ -1.94
SDC25YLL016W YKL133CP36066 463 aa2.95□□□□□ -1.94
SDC25YLL016W SHU2P38957 223 aa2.95□□□□□ -1.94
SDC25YLL016W GNP1P48813 663 aa2.95□□□□□ -1.94
SDC25YLL016W UBA2P52488 636 aa2.95□□□□□ -1.94
SDC25YLL016W RIA1P53893 1110 aa2.95□□□□□ -1.94
SDC25YLL016W SIW14P53965 281 aa2.95□□□□□ -1.94
SDC25YLL016W YDR306CQ06640 478 aa2.95□□□□□ -1.94
SDC25YLL016W YOR296WQ08748 1289 aa2.95□□□□□ -1.94
SDC25YLL016W CMR1Q12510 522 aaKnown RBP2.95□□□□□ -1.94
SDC25YLL016W HBN1Q96VH4 193 aa2.95□□□□□ -1.94
SDC25YLL016W GAL1P04385 528 aa2.94□□□□□ -1.94
SDC25YLL016W TAF13P11747 167 aa2.94□□□□□ -1.94
SDC25YLL016W SEC23P15303 768 aaKnown RBP2.94□□□□□ -1.94
SDC25YLL016W RAD53P22216 821 aa2.94□□□□□ -1.94
SDC25YLL016W PUF4P25339 888 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SDC25YLL016W PPH3P32345 308 aa2.94□□□□□ -1.94
SDC25YLL016W AAR2P32357 355 aaPredicted RBP2.94□□□□□ -1.94
SDC25YLL016W ATG14P38270 344 aa2.94□□□□□ -1.94
SDC25YLL016W MAL11P53048 616 aa2.94□□□□□ -1.94
SDC25YLL016W TGL2P54857 326 aa2.94□□□□□ -1.94
SDC25YLL016W MSH6Q03834 1242 aa2.94□□□□□ -1.94
SDC25YLL016W EMG1Q06287 252 aaKnown RBP2.94□□□□□ -1.94
SDC25YLL016W GYP1Q08484 637 aa2.94□□□□□ -1.94
SDC25YLL016W DUR3P33413 735 aa2.94□□□□□ -1.94
SDC25YLL016W EXO84P38261 753 aa2.94□□□□□ -1.94
SDC25YLL016W XDJ1P39102 459 aa2.94□□□□□ -1.94
SDC25YLL016W RKM4Q12504 494 aa2.94□□□□□ -1.94
SDC25YLL016W KRE5P22023 1365 aa2.94□□□□□ -1.94
SDC25YLL016W HVG1P0CE11 249 aa2.93□□□□□ -1.94
SDC25YLL016W HSP78P33416 811 aa2.93□□□□□ -1.94
SDC25YLL016W AHP1P38013 176 aaKnown RBP2.93□□□□□ -1.94
SDC25YLL016W SEC26P41810 973 aaKnown RBP2.93□□□□□ -1.94
SDC25YLL016W MTQ2Q03920 221 aaPredicted RBP2.93□□□□□ -1.94
SDC25YLL016W TIF35Q04067 274 aaKnown RBP2.93□□□□□ -1.94
SDC25YLL016W YPR071WQ12346 211 aa2.93□□□□□ -1.94
SDC25YLL016W MDM12Q92328 271 aa2.93□□□□□ -1.94
SDC25YLL016W OPI1P21957 404 aa2.93□□□□□ -1.94
SDC25YLL016W AEP2P22136 580 aa2.93□□□□□ -1.94
SDC25YLL016W MKK2P32491 506 aa2.93□□□□□ -1.94
SDC25YLL016W SCT1P32784 759 aa2.93□□□□□ -1.94
SDC25YLL016W MAL31P38156 614 aa2.93□□□□□ -1.94
SDC25YLL016W LCB5Q06147 687 aaKnown RBP2.93□□□□□ -1.94
SDC25YLL016W YLR001CQ07895 862 aa2.93□□□□□ -1.94
SDC25YLL016W SYP1P25623 870 aaKnown RBP2.93□□□□□ -1.94
SDC25YLL016W SPT23P35210 1082 aa2.93□□□□□ -1.94
SDC25YLL016W APM2P38700 605 aa2.93□□□□□ -1.94
SDC25YLL016W HXT13P39924 564 aa2.93□□□□□ -1.94
SDC25YLL016W HXT17P53631 564 aa2.93□□□□□ -1.94
SDC25YLL016W HXT15P54854 567 aa2.93□□□□□ -1.94
SDC25YLL016W YMR018WQ04364 514 aa2.93□□□□□ -1.94
SDC25YLL016W AOS1Q06624 347 aa2.93□□□□□ -1.94
SDC25YLL016W FKS3Q04952 1785 aa2.92□□□□□ -1.94
SDC25YLL016W ROM2P51862 1356 aaKnown RBP2.92□□□□□ -1.94
SDC25YLL016W FOB1O13329 566 aa2.92□□□□□ -1.94
SDC25YLL016W MSD1P15179 658 aaKnown RBP2.92□□□□□ -1.94
SDC25YLL016W NAB2P32505 525 aaKnown RBP RIP-Chip data2.92□□□□□ -1.94not detected
SDC25YLL016W YKL077WP36081 392 aa2.92□□□□□ -1.94
SDC25YLL016W NDE1P40215 560 aa2.92□□□□□ -1.94
SDC25YLL016W UBP6P43593 499 aaKnown RBP2.92□□□□□ -1.94
SDC25YLL016W ALG2P43636 503 aa2.92□□□□□ -1.94
SDC25YLL016W JJJ2P46997 583 aa2.92□□□□□ -1.94
SDC25YLL016W IML2P47031 731 aa2.92□□□□□ -1.94
SDC25YLL016W EST2Q06163 884 aa2.92□□□□□ -1.94
SDC25YLL016W MLC2Q06580 163 aa2.92□□□□□ -1.94
SDC25YLL016W GUD1Q07729 489 aa2.92□□□□□ -1.94
SDC25YLL016W PSR2Q07949 397 aa2.92□□□□□ -1.94
SDC25YLL016W CDC9P04819 755 aa2.92□□□□□ -1.94
SDC25YLL016W APA1P16550 321 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms