RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W ABD1P32783 436 aaPredicted RBP5.11□□□□□ -1.59
MSN4YKL062W MPE1P35728 441 aaKnown RBP5.11□□□□□ -1.59
MSN4YKL062W SNF7P39929 240 aaKnown RBP5.11□□□□□ -1.59
MSN4YKL062W ECM16Q04217 1267 aaKnown RBP5.11□□□□□ -1.59
MSN4YKL062W RSC58Q07979 502 aa5.11□□□□□ -1.59
MSN4YKL062W HIF1Q12373 385 aa5.11□□□□□ -1.59
MSN4YKL062W RPL11AP0C0W9 174 aaKnown RBP5.11□□□□□ -1.59
MSN4YKL062W AIM26P32858 118 aa5.11□□□□□ -1.59
MSN4YKL062W PIN4P34217 668 aaKnown RBP RIP-Chip data5.11□□□□□ -1.59not detected
MSN4YKL062W YKL069WP36088 180 aa5.11□□□□□ -1.59
MSN4YKL062W PIK1P39104 1066 aa5.11□□□□□ -1.59
MSN4YKL062W POB3Q04636 552 aaKnown RBP5.11□□□□□ -1.59
MSN4YKL062W SPP382Q06411 708 aaPredicted RBP5.11□□□□□ -1.59
MSN4YKL062W RSB1Q08417 382 aa5.11□□□□□ -1.59
MSN4YKL062W RPL11BQ3E757 174 aaPredicted RBP5.11□□□□□ -1.59
MSN4YKL062W SBA1P28707 216 aaKnown RBP5.1□□□□□ -1.59
MSN4YKL062W HSP78P33416 811 aa5.1□□□□□ -1.59
MSN4YKL062W MXR1P40029 184 aa5.1□□□□□ -1.59
MSN4YKL062W BUD6P41697 788 aa5.1□□□□□ -1.59
MSN4YKL062W YFL054CP43549 646 aa5.1□□□□□ -1.59
MSN4YKL062W LPX1Q12405 387 aaKnown RBP5.1□□□□□ -1.59
MSN4YKL062W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.09□□□□□ -1.59not detected
MSN4YKL062W DBP2P24783 546 aaKnown RBP5.09□□□□□ -1.59
MSN4YKL062W ERP2P39704 215 aa5.09□□□□□ -1.59
MSN4YKL062W ORC3P54790 616 aa5.09□□□□□ -1.59
MSN4YKL062W RPN4Q03465 531 aa5.09□□□□□ -1.59
MSN4YKL062W GIR2Q03768 265 aaPredicted RBP5.09□□□□□ -1.59
MSN4YKL062W SSF2Q12153 453 aaPredicted RBP5.09□□□□□ -1.59
MSN4YKL062W PNT1P38969 423 aa5.09□□□□□ -1.6
MSN4YKL062W RPT2P40327 437 aaKnown RBP5.09□□□□□ -1.6
MSN4YKL062W NOP2P40991 618 aaKnown RBP5.09□□□□□ -1.6
MSN4YKL062W DNM1P54861 757 aa5.09□□□□□ -1.6
MSN4YKL062W SHE9Q04172 456 aa5.09□□□□□ -1.6
MSN4YKL062W VBA5P36172 582 aa5.08□□□□□ -1.6
MSN4YKL062W GEM1P39722 662 aa5.08□□□□□ -1.6
MSN4YKL062W SIP5P40210 489 aaKnown RBP5.08□□□□□ -1.6
MSN4YKL062W CWC22P53333 577 aaKnown RBP5.08□□□□□ -1.6
MSN4YKL062W NSE3Q05541 303 aa5.08□□□□□ -1.6
MSN4YKL062W TDA5Q06417 326 aaKnown RBP5.08□□□□□ -1.6
MSN4YKL062W ACM1Q08981 209 aa5.08□□□□□ -1.6
MSN4YKL062W SPS1P08458 490 aa5.07□□□□□ -1.6
MSN4YKL062W KAR1P11927 433 aa5.07□□□□□ -1.6
MSN4YKL062W GRX1P25373 110 aaKnown RBP5.07□□□□□ -1.6
MSN4YKL062W SPF1P39986 1215 aaKnown RBP5.07□□□□□ -1.6
MSN4YKL062W YJR142WP47173 342 aa5.07□□□□□ -1.6
MSN4YKL062W FOL2P51601 243 aaKnown RBP5.07□□□□□ -1.6
MSN4YKL062W TMA64Q04600 565 aaKnown RBP5.07□□□□□ -1.6
MSN4YKL062W UGA2P38067 497 aa5.07□□□□□ -1.6
MSN4YKL062W ENP1P38333 483 aaKnown RBP5.07□□□□□ -1.6
MSN4YKL062W NRD1P53617 575 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
MSN4YKL062W POL12P38121 705 aaPredicted RBP5.06□□□□□ -1.6
MSN4YKL062W PBP2P38151 413 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
MSN4YKL062W MBP1P39678 833 aa5.06□□□□□ -1.6
MSN4YKL062W DFG16Q99234 619 aa5.06□□□□□ -1.6
MSN4YKL062W SEC6P32844 805 aa5.05□□□□□ -1.6
MSN4YKL062W LRG1P35688 1017 aa5.05□□□□□ -1.6
MSN4YKL062W MNN1P39106 762 aa5.05□□□□□ -1.6
MSN4YKL062W UBP12P39538 1254 aa5.05□□□□□ -1.6
MSN4YKL062W SEC26P41810 973 aaKnown RBP5.05□□□□□ -1.6
MSN4YKL062W SVL3Q03088 825 aaKnown RBP5.05□□□□□ -1.6
MSN4YKL062W SLA2P33338 968 aa5.05□□□□□ -1.6
MSN4YKL062W MRP8P35719 219 aa5.05□□□□□ -1.6
MSN4YKL062W YGR161W-CQ3E744 92 aa5.05□□□□□ -1.6
MSN4YKL062W THS1P04801 734 aaKnown RBP5.04□□□□□ -1.6
MSN4YKL062W GRX7P38068 203 aa5.04□□□□□ -1.6
MSN4YKL062W FUI1P38196 639 aa5.04□□□□□ -1.6
MSN4YKL062W IRR1P40541 1150 aa5.04□□□□□ -1.6
MSN4YKL062W STI1P15705 589 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
MSN4YKL062W STE5P32917 917 aa5.03□□□□□ -1.6
MSN4YKL062W RFC5P38251 354 aa5.03□□□□□ -1.6
MSN4YKL062W PBY1P38254 753 aa5.03□□□□□ -1.6
MSN4YKL062W NOC2P39744 710 aaKnown RBP5.03□□□□□ -1.6
MSN4YKL062W COG4Q06096 861 aa5.03□□□□□ -1.6
MSN4YKL062W SVS1Q12254 260 aa5.03□□□□□ -1.6
MSN4YKL062W BI4P03879 638 aa5.03□□□□□ -1.6
MSN4YKL062W YBR184WP38299 523 aa5.03□□□□□ -1.6
MSN4YKL062W YEN1P40028 759 aa5.03□□□□□ -1.6
MSN4YKL062W VPS27P40343 622 aaKnown RBP5.03□□□□□ -1.6
MSN4YKL062W ECL1P48235 211 aa5.03□□□□□ -1.6
MSN4YKL062W YGL081WP53156 320 aa5.03□□□□□ -1.6
MSN4YKL062W ENV11P53246 860 aa5.03□□□□□ -1.6
MSN4YKL062W ATG13Q06628 738 aa5.03□□□□□ -1.6
MSN4YKL062W CDC53Q12018 815 aaKnown RBP5.03□□□□□ -1.6
MSN4YKL062W NKP1Q12493 238 aa5.03□□□□□ -1.6
MSN4YKL062W TRX2P22803 104 aaKnown RBP5.02□□□□□ -1.61
MSN4YKL062W ETP1P38748 585 aaKnown RBP5.02□□□□□ -1.61
MSN4YKL062W TAT2P38967 592 aa5.02□□□□□ -1.61
MSN4YKL062W BDF2Q07442 638 aa5.02□□□□□ -1.61
MSN4YKL062W ACE2P21192 770 aa5.01□□□□□ -1.61
MSN4YKL062W PWP2P25635 923 aaKnown RBP5.01□□□□□ -1.61
MSN4YKL062W VPS24P36095 224 aaKnown RBP5.01□□□□□ -1.61
MSN4YKL062W ABZ1P37254 787 aaPredicted RBP5.01□□□□□ -1.61
MSN4YKL062W YJL049WP47048 450 aa5.01□□□□□ -1.61
MSN4YKL062W MAP1Q01662 387 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
MSN4YKL062W NAN1Q02931 896 aaKnown RBP5.01□□□□□ -1.61
MSN4YKL062W MET6P05694 767 aaKnown RBP5□□□□□ -1.61
MSN4YKL062W RPS0AP32905 252 aaKnown RBP5□□□□□ -1.61
MSN4YKL062W SEG2P34250 1132 aa5□□□□□ -1.61
MSN4YKL062W RRT14P40470 206 aa5□□□□□ -1.61
MSN4YKL062W RSM24Q03976 319 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 37.7 ms