RNA–Protein interactions for RNA: YGR003W

CUL3, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene CUL3, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUL3YGR003W PHO4P07270 312 aaKnown RBP2.57□□□□□ -2
CUL3YGR003W CHA4P43634 648 aa2.57□□□□□ -2
CUL3YGR003W RPP2AP05319 106 aaKnown RBP2.56□□□□□ -2
CUL3YGR003W YMR206WQ03695 313 aa2.56□□□□□ -2
CUL3YGR003W KCS1Q12494 1050 aa2.56□□□□□ -2
CUL3YGR003W SEC23P15303 768 aaKnown RBP2.56□□□□□ -2
CUL3YGR003W ATE1P16639 503 aa2.56□□□□□ -2
CUL3YGR003W MTH1P35198 433 aa2.56□□□□□ -2
CUL3YGR003W PPX1P38698 397 aa2.56□□□□□ -2
CUL3YGR003W ENB1Q08299 606 aa2.56□□□□□ -2
CUL3YGR003W MDM10P18409 493 aa2.55□□□□□ -2
CUL3YGR003W DAL4Q04895 635 aa2.55□□□□□ -2
CUL3YGR003W SPC42P36094 363 aa2.54□□□□□ -2
CUL3YGR003W KTR4P38131 464 aa2.54□□□□□ -2
CUL3YGR003W ZRG8P40021 1076 aa2.54□□□□□ -2
CUL3YGR003W RRP15Q06511 250 aaPredicted RBP2.54□□□□□ -2
CUL3YGR003W STM1P39015 273 aaKnown RBP2.54□□□□□ -2
CUL3YGR003W GND2P53319 492 aa2.54□□□□□ -2
CUL3YGR003W ENA1P13587 1091 aa2.53□□□□□ -2
CUL3YGR003W ACE2P21192 770 aa2.53□□□□□ -2
CUL3YGR003W FAA3P39002 694 aa2.53□□□□□ -2
CUL3YGR003W THI12P42883 340 aa2.53□□□□□ -2
CUL3YGR003W THI5P43534 340 aa2.53□□□□□ -2
CUL3YGR003W THI11P47183 340 aa2.53□□□□□ -2
CUL3YGR003W ENA2Q01896 1091 aa2.53□□□□□ -2
CUL3YGR003W THI13Q07748 340 aa2.53□□□□□ -2
CUL3YGR003W LAS17Q12446 633 aa2.53□□□□□ -2
CUL3YGR003W ENA5Q12691 1091 aa2.53□□□□□ -2
CUL3YGR003W YER152CP10356 443 aa2.52□□□□□ -2.01
CUL3YGR003W TMT1P32643 299 aa2.52□□□□□ -2.01
CUL3YGR003W RPT1P33299 467 aaKnown RBP2.52□□□□□ -2.01
CUL3YGR003W BUL1P48524 976 aa2.52□□□□□ -2.01
CUL3YGR003W ADI1Q03677 179 aa2.52□□□□□ -2.01
CUL3YGR003W MCM2P29469 868 aa2.52□□□□□ -2.01
CUL3YGR003W FYV10P40492 516 aa2.52□□□□□ -2.01
CUL3YGR003W RAT1Q02792 1006 aaKnown RBP2.52□□□□□ -2.01
CUL3YGR003W BAS1P22035 811 aa2.51□□□□□ -2.01
CUL3YGR003W ERG4P25340 473 aa2.51□□□□□ -2.01
CUL3YGR003W SEC5P89102 971 aa2.51□□□□□ -2.01
CUL3YGR003W MUK1Q02866 612 aa2.51□□□□□ -2.01
CUL3YGR003W SPR28Q04921 423 aa2.51□□□□□ -2.01
CUL3YGR003W NPC2Q12408 173 aa2.51□□□□□ -2.01
CUL3YGR003W HXK1P04806 485 aaKnown RBP2.5□□□□□ -2.01
CUL3YGR003W RGD1P38339 666 aa2.5□□□□□ -2.01
CUL3YGR003W PIC2P40035 300 aa2.5□□□□□ -2.01
CUL3YGR003W RRT14P40470 206 aa2.5□□□□□ -2.01
CUL3YGR003W COQ11Q05892 277 aa2.5□□□□□ -2.01
CUL3YGR003W SEC20P28791 383 aa2.5□□□□□ -2.01
CUL3YGR003W VPS35P34110 944 aa2.5□□□□□ -2.01
CUL3YGR003W POL32P47110 350 aa2.5□□□□□ -2.01
CUL3YGR003W RNT1Q02555 471 aa2.5□□□□□ -2.01
CUL3YGR003W GCD6P32501 712 aaKnown RBP2.49□□□□□ -2.01
CUL3YGR003W HFM1P51979 1187 aa2.49□□□□□ -2.01
CUL3YGR003W YPL109CQ02981 657 aa2.49□□□□□ -2.01
CUL3YGR003W TAF13P11747 167 aa2.49□□□□□ -2.01
CUL3YGR003W KAR4P25583 335 aa2.49□□□□□ -2.01
CUL3YGR003W UGA2P38067 497 aa2.49□□□□□ -2.01
CUL3YGR003W RPS26AP39938 119 aaKnown RBP2.49□□□□□ -2.01
CUL3YGR003W RPS26BP39939 119 aaKnown RBP2.49□□□□□ -2.01
CUL3YGR003W YJR107WP47145 328 aa2.49□□□□□ -2.01
CUL3YGR003W GLO1P50107 326 aa2.49□□□□□ -2.01
CUL3YGR003W IMO32P53219 342 aa2.49□□□□□ -2.01
CUL3YGR003W YNL162W-AQ3E7A8 72 aa2.49□□□□□ -2.01
CUL3YGR003W BI4P03879 638 aa2.48□□□□□ -2.01
CUL3YGR003W CAD1P24813 409 aaKnown RBP2.48□□□□□ -2.01
CUL3YGR003W MLS1P30952 554 aa2.48□□□□□ -2.01
CUL3YGR003W PPZ2P33329 710 aa2.48□□□□□ -2.01
CUL3YGR003W BNR1P40450 1375 aa2.48□□□□□ -2.01
CUL3YGR003W MKK2P32491 506 aa2.48□□□□□ -2.01
CUL3YGR003W SEC8P32855 1065 aa2.48□□□□□ -2.01
CUL3YGR003W ROD1Q02805 837 aa2.48□□□□□ -2.01
CUL3YGR003W GUP2Q08929 609 aa2.48□□□□□ -2.01
CUL3YGR003W CYC8P14922 966 aa2.47□□□□□ -2.01
CUL3YGR003W SLD2P34252 453 aa2.47□□□□□ -2.01
CUL3YGR003W HBT1Q07653 1046 aaKnown RBP2.47□□□□□ -2.01
CUL3YGR003W OXR1Q08952 273 aa2.47□□□□□ -2.01
CUL3YGR003W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
CUL3YGR003W PPR1P07272 904 aaPredicted RBP2.46□□□□□ -2.01
CUL3YGR003W SDS3P40505 327 aa2.46□□□□□ -2.01
CUL3YGR003W NCS6P53088 359 aa2.46□□□□□ -2.01
CUL3YGR003W TRP4P07285 380 aaPredicted RBP2.46□□□□□ -2.02
CUL3YGR003W ALG7P07286 448 aa2.46□□□□□ -2.02
CUL3YGR003W HEM3P28789 327 aa2.46□□□□□ -2.02
CUL3YGR003W RIX1P38883 763 aaPredicted RBP2.46□□□□□ -2.02
CUL3YGR003W MXR1P40029 184 aa2.46□□□□□ -2.02
CUL3YGR003W YGR012WP53206 393 aa2.46□□□□□ -2.02
CUL3YGR003W YGR122WP53272 402 aa2.46□□□□□ -2.02
CUL3YGR003W OYE2Q03558 400 aaKnown RBP2.46□□□□□ -2.02
CUL3YGR003W ACM1Q08981 209 aa2.46□□□□□ -2.02
CUL3YGR003W MRH1Q12117 320 aaPredicted RBP2.46□□□□□ -2.02
CUL3YGR003W RAD2P07276 1031 aa2.45□□□□□ -2.02
CUL3YGR003W SPE1P08432 466 aa2.45□□□□□ -2.02
CUL3YGR003W GNP1P48813 663 aa2.45□□□□□ -2.02
CUL3YGR003W XYL2Q07993 356 aa2.45□□□□□ -2.02
CUL3YGR003W THS1P04801 734 aaKnown RBP2.45□□□□□ -2.02
CUL3YGR003W TUB1P09733 447 aaKnown RBP2.45□□□□□ -2.02
CUL3YGR003W PRE9P23638 258 aaKnown RBP2.45□□□□□ -2.02
CUL3YGR003W PSP2P50109 593 aaKnown RBP2.45□□□□□ -2.02
CUL3YGR003W SCS3P53012 380 aa2.45□□□□□ -2.02
CUL3YGR003W SUT2Q12286 268 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms