RNA–Protein interactions for RNA: YER103W

SSA4, Transcript of Heat shock protein that is highly induced upon stress, yeast

Gene SSA4, Length 1,929 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA4	YER103W	ANP1	P32629	500 aa		13.74	□□□□□ -0.21
SSA4	YER103W	TIF4631	P39935	952 aa	Known RBP	13.74	□□□□□ -0.21
SSA4	YER103W	URB2	P47108	1174 aa		13.74	□□□□□ -0.21
SSA4	YER103W	PCL10	P53124	433 aa		13.74	□□□□□ -0.21
SSA4	YER103W	DIG1	Q03063	452 aa	Known RBP	13.74	□□□□□ -0.21
SSA4	YER103W	MET6	P05694	767 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	PRP9	P19736	530 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	RNR3	P21672	869 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	YKL091C	P33324	310 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	KAP123	P40069	1113 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	SMX2	P40204	77 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	TDA10	P42938	290 aa		13.73	□□□□□ -0.21
SSA4	YER103W	SGM1	P47166	707 aa		13.73	□□□□□ -0.21
SSA4	YER103W	TAD1	P53065	400 aa		13.73	□□□□□ -0.21
SSA4	YER103W	GIR2	Q03768	265 aa	Predicted RBP	13.73	□□□□□ -0.21
SSA4	YER103W	SLK19	Q08581	821 aa	Known RBP	13.73	□□□□□ -0.21
SSA4	YER103W	NKP1	Q12493	238 aa		13.73	□□□□□ -0.21
SSA4	YER103W	MVD1	P32377	396 aa	Known RBP	13.72	□□□□□ -0.21
SSA4	YER103W	VTC2	P43585	828 aa		13.72	□□□□□ -0.21
SSA4	YER103W	GIS4	Q04233	774 aa		13.72	□□□□□ -0.21
SSA4	YER103W	RSA3	Q05942	220 aa	Known RBP	13.72	□□□□□ -0.21
SSA4	YER103W	ERG11	P10614	530 aa		13.72	□□□□□ -0.21
SSA4	YER103W	SCJ1	P25303	377 aa		13.72	□□□□□ -0.21
SSA4	YER103W	LIN1	P38852	340 aa	Predicted RBP	13.72	□□□□□ -0.21
SSA4	YER103W	CSM2	P40465	213 aa		13.72	□□□□□ -0.21
SSA4	YER103W	GVP36	P40531	326 aa	Known RBP	13.72	□□□□□ -0.21
SSA4	YER103W	SAP185	P40856	1058 aa		13.72	□□□□□ -0.21
SSA4	YER103W	THI12	P42883	340 aa		13.72	□□□□□ -0.21
SSA4	YER103W	THI5	P43534	340 aa		13.72	□□□□□ -0.21
SSA4	YER103W	THI11	P47183	340 aa		13.72	□□□□□ -0.21
SSA4	YER103W	UBA2	P52488	636 aa		13.72	□□□□□ -0.21
SSA4	YER103W	THI13	Q07748	340 aa		13.72	□□□□□ -0.21
SSA4	YER103W	NUC1	P08466	329 aa		13.71	□□□□□ -0.21
SSA4	YER103W	KEX2	P13134	814 aa		13.71	□□□□□ -0.21
SSA4	YER103W	BAS1	P22035	811 aa		13.71	□□□□□ -0.21
SSA4	YER103W	NAM7	P30771	971 aa	Known RBP	13.71	□□□□□ -0.21
SSA4	YER103W	YFL034W	P43564	1073 aa		13.71	□□□□□ -0.21
SSA4	YER103W	KAP114	P53067	1004 aa		13.71	□□□□□ -0.21
SSA4	YER103W	YGL138C	P53122	345 aa		13.71	□□□□□ -0.21
SSA4	YER103W	MDR1	P53258	950 aa		13.71	□□□□□ -0.21
SSA4	YER103W	MLH2	Q07980	695 aa		13.71	□□□□□ -0.21
SSA4	YER103W	OCA6	Q12454	224 aa		13.71	□□□□□ -0.21
SSA4	YER103W	INA22	P40576	216 aa		13.7	□□□□□ -0.22
SSA4	YER103W	UBP6	P43593	499 aa	Known RBP	13.7	□□□□□ -0.22
SSA4	YER103W	ARI1	P53111	347 aa	Known RBP	13.7	□□□□□ -0.22
SSA4	YER103W	PNP1	Q05788	311 aa		13.7	□□□□□ -0.22
SSA4	YER103W	FRA1	Q07825	749 aa		13.7	□□□□□ -0.22
SSA4	YER103W	SRV2	P17555	526 aa	Known RBP	13.7	□□□□□ -0.22
SSA4	YER103W	RPC53	P25441	422 aa		13.7	□□□□□ -0.22
SSA4	YER103W	MYO3	P36006	1272 aa		13.7	□□□□□ -0.22
SSA4	YER103W	ORM2	Q06144	216 aa		13.7	□□□□□ -0.22
SSA4	YER103W	MAK31	P23059	88 aa		13.69	□□□□□ -0.22
SSA4	YER103W	UBP1	P25037	809 aa		13.69	□□□□□ -0.22
SSA4	YER103W	XRS2	P33301	854 aa		13.69	□□□□□ -0.22
SSA4	YER103W	NPL4	P33755	580 aa		13.69	□□□□□ -0.22
SSA4	YER103W	JNM1	P36224	373 aa		13.69	□□□□□ -0.22
SSA4	YER103W	LAM1	P38851	1228 aa		13.69	□□□□□ -0.22
SSA4	YER103W	DAS1	P47005	663 aa		13.69	□□□□□ -0.22
SSA4	YER103W	TOF1	P53840	1238 aa		13.69	□□□□□ -0.22
SSA4	YER103W	BDF2	Q07442	638 aa		13.69	□□□□□ -0.22
SSA4	YER103W	YVC1	Q12324	675 aa		13.69	□□□□□ -0.22
SSA4	YER103W	SEY1	Q99287	776 aa		13.69	□□□□□ -0.22
SSA4	YER103W	SSB1	P11484	613 aa	Known RBP	13.68	□□□□□ -0.22
SSA4	YER103W	RPL5	P26321	297 aa	Known RBP	13.68	□□□□□ -0.22
SSA4	YER103W	SSB2	P40150	613 aa	Known RBP	13.68	□□□□□ -0.22
SSA4	YER103W	IAH1	P41734	238 aa		13.68	□□□□□ -0.22
SSA4	YER103W	GPN2	Q08726	347 aa	Predicted RBP	13.68	□□□□□ -0.22
SSA4	YER103W	RIM15	P43565	1770 aa		13.68	□□□□□ -0.22
SSA4	YER103W	YGR153W	P48238	217 aa		13.68	□□□□□ -0.22
SSA4	YER103W	INP2	Q03824	705 aa		13.68	□□□□□ -0.22
SSA4	YER103W	TMA64	Q04600	565 aa	Known RBP	13.68	□□□□□ -0.22
SSA4	YER103W	YDR341C	Q05506	607 aa	Known RBP	13.68	□□□□□ -0.22
SSA4	YER103W	TUF1	P02992	437 aa	Known RBP	13.67	□□□□□ -0.22
SSA4	YER103W	ADH4	P10127	382 aa		13.67	□□□□□ -0.22
SSA4	YER103W	PRI1	P10363	409 aa		13.67	□□□□□ -0.22
SSA4	YER103W	STT3	P39007	718 aa	Known RBP	13.67	□□□□□ -0.22
SSA4	YER103W	MMM1	P41800	426 aa		13.67	□□□□□ -0.22
SSA4	YER103W	THI6	P41835	540 aa		13.67	□□□□□ -0.22
SSA4	YER103W	ALG2	P43636	503 aa		13.67	□□□□□ -0.22
SSA4	YER103W	CPR6	P53691	371 aa	Known RBP	13.67	□□□□□ -0.22
SSA4	YER103W	REC107	P21651	314 aa		13.66	□□□□□ -0.22
SSA4	YER103W	POL3	P15436	1097 aa		13.66	□□□□□ -0.22
SSA4	YER103W	PWP1	P21304	576 aa	Known RBP	13.66	□□□□□ -0.22
SSA4	YER103W	SMY1	P32364	656 aa	Known RBP	13.66	□□□□□ -0.22
SSA4	YER103W	GEF1	P37020	779 aa		13.66	□□□□□ -0.22
SSA4	YER103W	BEM4	P39011	633 aa		13.66	□□□□□ -0.22
SSA4	YER103W	YIR042C	P40586	236 aa		13.66	□□□□□ -0.22
SSA4	YER103W	NMD5	P46970	1048 aa		13.66	□□□□□ -0.22
SSA4	YER103W	EEB1	Q02891	456 aa		13.66	□□□□□ -0.22
SSA4	YER103W	FOB1	O13329	566 aa		13.65	□□□□□ -0.22
SSA4	YER103W	TAL1	P15019	335 aa	Known RBP	13.65	□□□□□ -0.22
SSA4	YER103W	SSE1	P32589	693 aa	Known RBP	13.65	□□□□□ -0.22
SSA4	YER103W	YME1	P32795	747 aa		13.65	□□□□□ -0.22
SSA4	YER103W	ECM4	P36156	370 aa		13.65	□□□□□ -0.22
SSA4	YER103W	PPX1	P38698	397 aa		13.65	□□□□□ -0.22
SSA4	YER103W	VID27	P40157	782 aa		13.65	□□□□□ -0.22
SSA4	YER103W	ATP25	Q03153	612 aa		13.65	□□□□□ -0.22
SSA4	YER103W	INM2	Q05533	292 aa		13.65	□□□□□ -0.22
SSA4	YER103W	YPR078C	Q06813	372 aa		13.65	□□□□□ -0.22
SSA4	YER103W	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.64	□□□□□ -0.23	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms