RNA–Protein interactions for RNA: YDR439W

LRS4, Transcript of Nucleolar protein that forms a complex with Csm1p, yeast

Gene LRS4, Length 1,044 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRS4	YDR439W	NOP12	Q08208	459 aa	Known RBP	5.03	□□□□□ -1.6
LRS4	YDR439W	HMI1	Q12039	706 aa		5.03	□□□□□ -1.6
LRS4	YDR439W	EMC1	P25574	760 aa		5.02	□□□□□ -1.61
LRS4	YDR439W	CHS7	P38843	316 aa		5.02	□□□□□ -1.61
LRS4	YDR439W	GNP1	P48813	663 aa		5.02	□□□□□ -1.61
LRS4	YDR439W	MSC2	Q03455	724 aa		5.02	□□□□□ -1.61
LRS4	YDR439W	OYE2	Q03558	400 aa	Known RBP	5.02	□□□□□ -1.61
LRS4	YDR439W	DBP5	P20449	482 aa	Known RBP	5.01	□□□□□ -1.61
LRS4	YDR439W	FYV10	P40492	516 aa		5.01	□□□□□ -1.61
LRS4	YDR439W	RAD2	P07276	1031 aa		5	□□□□□ -1.61
LRS4	YDR439W	ACE2	P21192	770 aa		5	□□□□□ -1.61
LRS4	YDR439W	BAS1	P22035	811 aa		5	□□□□□ -1.61
LRS4	YDR439W	RAD53	P22216	821 aa		5	□□□□□ -1.61
LRS4	YDR439W	GCV2	P49095	1034 aa		5	□□□□□ -1.61
LRS4	YDR439W	SVF1	Q05515	481 aa		5	□□□□□ -1.61
LRS4	YDR439W	DEF1	P35732	738 aa	Known RBP	4.99	□□□□□ -1.61
LRS4	YDR439W	MPH1	P40562	993 aa		4.99	□□□□□ -1.61
LRS4	YDR439W	MRL1	Q06815	381 aa		4.99	□□□□□ -1.61
LRS4	YDR439W	CYC8	P14922	966 aa		4.98	□□□□□ -1.61
LRS4	YDR439W	PLB1	P39105	664 aa		4.98	□□□□□ -1.61
LRS4	YDR439W	RRT14	P40470	206 aa		4.98	□□□□□ -1.61
LRS4	YDR439W	PEP7	P32609	515 aa		4.97	□□□□□ -1.61
LRS4	YDR439W	UGA2	P38067	497 aa		4.97	□□□□□ -1.61
LRS4	YDR439W	MSS4	P38994	779 aa		4.97	□□□□□ -1.61
LRS4	YDR439W	SIP5	P40210	489 aa	Known RBP	4.97	□□□□□ -1.61
LRS4	YDR439W	IOC3	P43596	787 aa		4.97	□□□□□ -1.61
LRS4	YDR439W	KIN4	Q01919	800 aa		4.97	□□□□□ -1.61
LRS4	YDR439W	GCR1	P07261	785 aa		4.96	□□□□□ -1.62
LRS4	YDR439W	MCM2	P29469	868 aa		4.96	□□□□□ -1.62
LRS4	YDR439W	MND2	P40577	368 aa		4.96	□□□□□ -1.62
LRS4	YDR439W	TPO1	Q07824	586 aa		4.96	□□□□□ -1.62
LRS4	YDR439W	ACM1	Q08981	209 aa		4.96	□□□□□ -1.62
LRS4	YDR439W	THS1	P04801	734 aa	Known RBP	4.95	□□□□□ -1.62
LRS4	YDR439W	GEM1	P39722	662 aa		4.95	□□□□□ -1.62
LRS4	YDR439W	RPS26A	P39938	119 aa	Known RBP	4.95	□□□□□ -1.62
LRS4	YDR439W	RPS26B	P39939	119 aa	Known RBP	4.95	□□□□□ -1.62
LRS4	YDR439W	MXR1	P40029	184 aa		4.95	□□□□□ -1.62
LRS4	YDR439W	MET12	P46151	657 aa		4.95	□□□□□ -1.62
LRS4	YDR439W	GNT1	Q12096	491 aa		4.95	□□□□□ -1.62
LRS4	YDR439W	BI4	P03879	638 aa		4.94	□□□□□ -1.62
LRS4	YDR439W	RPL11A	P0C0W9	174 aa	Known RBP	4.94	□□□□□ -1.62
LRS4	YDR439W	POA1	P38218	177 aa		4.94	□□□□□ -1.62
LRS4	YDR439W	MGE1	P38523	228 aa		4.94	□□□□□ -1.62
LRS4	YDR439W	SPR28	Q04921	423 aa		4.94	□□□□□ -1.62
LRS4	YDR439W	ADY3	Q07732	790 aa		4.94	□□□□□ -1.62
LRS4	YDR439W	RPL11B	Q3E757	174 aa	Predicted RBP	4.94	□□□□□ -1.62
LRS4	YDR439W	RPP2A	P05319	106 aa	Known RBP	4.93	□□□□□ -1.62
LRS4	YDR439W	HIS5	P07172	385 aa		4.93	□□□□□ -1.62
LRS4	YDR439W	NNF1	P47149	201 aa		4.93	□□□□□ -1.62
LRS4	YDR439W	HFM1	P51979	1187 aa		4.93	□□□□□ -1.62
LRS4	YDR439W	JIP5	Q06214	492 aa	Predicted RBP	4.93	□□□□□ -1.62
LRS4	YDR439W	RAD27	P26793	382 aa		4.92	□□□□□ -1.62
LRS4	YDR439W	SLA2	P33338	968 aa		4.92	□□□□□ -1.62
LRS4	YDR439W	RER2	P35196	286 aa		4.92	□□□□□ -1.62
LRS4	YDR439W	MCM7	P38132	845 aa		4.92	□□□□□ -1.62
LRS4	YDR439W	ZRG8	P40021	1076 aa		4.92	□□□□□ -1.62
LRS4	YDR439W	CHA4	P43634	648 aa		4.92	□□□□□ -1.62
LRS4	YDR439W	TIF35	Q04067	274 aa	Known RBP	4.92	□□□□□ -1.62
LRS4	YDR439W	DBP2	P24783	546 aa	Known RBP	4.91	□□□□□ -1.62
LRS4	YDR439W	EXG2	P52911	562 aa		4.91	□□□□□ -1.62
LRS4	YDR439W	YML122C	Q03207	126 aa		4.91	□□□□□ -1.62
LRS4	YDR439W	VPS16	Q03308	798 aa		4.91	□□□□□ -1.62
LRS4	YDR439W	PFK1	P16861	987 aa	Known RBP	4.9	□□□□□ -1.63
LRS4	YDR439W	OAR1	P35731	278 aa		4.9	□□□□□ -1.63
LRS4	YDR439W	SPC42	P36094	363 aa		4.9	□□□□□ -1.63
LRS4	YDR439W	PNT1	P38969	423 aa		4.9	□□□□□ -1.63
LRS4	YDR439W	AIM39	Q08223	395 aa		4.9	□□□□□ -1.63
LRS4	YDR439W	PPM2	Q08282	695 aa		4.9	□□□□□ -1.63
LRS4	YDR439W	RTT10	Q08924	1013 aa		4.9	□□□□□ -1.63
LRS4	YDR439W	HRR25	P29295	494 aa	Known RBP	4.89	□□□□□ -1.63
LRS4	YDR439W	VAC8	P39968	578 aa		4.89	□□□□□ -1.63
LRS4	YDR439W	ALD6	P54115	500 aa	Known RBP	4.89	□□□□□ -1.63
LRS4	YDR439W	DOS2	P54858	310 aa		4.89	□□□□□ -1.63
LRS4	YDR439W	SPP382	Q06411	708 aa	Predicted RBP	4.89	□□□□□ -1.63
LRS4	YDR439W	ENA1	P13587	1091 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	MOH1	P38191	138 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	MTC3	P53077	123 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	ENA2	Q01896	1091 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	FPR4	Q06205	392 aa	Predicted RBP	4.88	□□□□□ -1.63
LRS4	YDR439W	XYL2	Q07993	356 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	PIN2	Q12057	282 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	YOL098C	Q12496	1037 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	ENA5	Q12691	1091 aa		4.88	□□□□□ -1.63
LRS4	YDR439W	BRN1	P38170	754 aa		4.87	□□□□□ -1.63
LRS4	YDR439W	RMD1	Q03441	430 aa		4.87	□□□□□ -1.63
LRS4	YDR439W	TMA46	Q12000	345 aa	Known RBP	4.87	□□□□□ -1.63
LRS4	YDR439W	OSW2	Q12202	724 aa		4.87	□□□□□ -1.63
LRS4	YDR439W	KCS1	Q12494	1050 aa		4.87	□□□□□ -1.63
LRS4	YDR439W	YAP1801	P38856	637 aa		4.86	□□□□□ -1.63
LRS4	YDR439W	SSF2	Q12153	453 aa	Predicted RBP	4.86	□□□□□ -1.63
LRS4	YDR439W	UBA2	P52488	636 aa		4.85	□□□□□ -1.63
LRS4	YDR439W	ESF1	Q06344	628 aa	Known RBP	4.85	□□□□□ -1.63
LRS4	YDR439W	ENB1	Q08299	606 aa		4.85	□□□□□ -1.63
LRS4	YDR439W	YGR012W	P53206	393 aa		4.84	□□□□□ -1.63
LRS4	YDR439W	CIT2	P08679	460 aa		4.83	□□□□□ -1.64
LRS4	YDR439W	LYP1	P32487	611 aa		4.83	□□□□□ -1.64
LRS4	YDR439W	NMD2	P38798	1089 aa	Known RBP	4.83	□□□□□ -1.64
LRS4	YDR439W	CDA1	Q06702	301 aa		4.83	□□□□□ -1.64
LRS4	YDR439W	YLL058W	Q12198	575 aa		4.83	□□□□□ -1.64
LRS4	YDR439W	SPE1	P08432	466 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 215.9 ms