RNA–Protein interactions for RNA: YDL147W

RPN5, Transcript of Subunit of the CSN and 26S proteasome lid complexes, yeast

Gene RPN5, Length 1,338 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN5	YDL147W	RTS3	P53289	263 aa		7.06	□□□□□ -1.28
RPN5	YDL147W	LCD1	Q04377	747 aa		7.06	□□□□□ -1.28
RPN5	YDL147W	ACM1	Q08981	209 aa		7.06	□□□□□ -1.28
RPN5	YDL147W	THS1	P04801	734 aa	Known RBP	7.05	□□□□□ -1.28
RPN5	YDL147W	DBP2	P24783	546 aa	Known RBP	7.05	□□□□□ -1.28
RPN5	YDL147W	GPT2	P36148	743 aa		7.05	□□□□□ -1.28
RPN5	YDL147W	HOS3	Q02959	697 aa	Known RBP	7.05	□□□□□ -1.28
RPN5	YDL147W	MDM12	Q92328	271 aa		7.05	□□□□□ -1.28
RPN5	YDL147W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	7.04	□□□□□ -1.28	not detected
RPN5	YDL147W	ALG2	P43636	503 aa		7.04	□□□□□ -1.28
RPN5	YDL147W	PMT3	P47190	753 aa		7.04	□□□□□ -1.28
RPN5	YDL147W	MAL11	P53048	616 aa		7.04	□□□□□ -1.28
RPN5	YDL147W	NCE103	P53615	221 aa		7.04	□□□□□ -1.28
RPN5	YDL147W	YNL193W	P53870	558 aa		7.04	□□□□□ -1.28
RPN5	YDL147W	PRO1	P32264	428 aa		7.03	□□□□□ -1.28
RPN5	YDL147W	NMD3	P38861	518 aa	Known RBP	7.03	□□□□□ -1.28
RPN5	YDL147W	TNA1	P53322	534 aa		7.03	□□□□□ -1.28
RPN5	YDL147W	ATG13	Q06628	738 aa		7.03	□□□□□ -1.28
RPN5	YDL147W	BOI2	P39969	1040 aa		7.02	□□□□□ -1.28
RPN5	YDL147W	YJL045W	P47052	634 aa		7.02	□□□□□ -1.28
RPN5	YDL147W	YNR014W	P53719	212 aa		7.02	□□□□□ -1.28
RPN5	YDL147W	TPP1	Q03796	238 aa		7.02	□□□□□ -1.28
RPN5	YDL147W	TY1A-NL1	Q12391	440 aa	Known RBP	7.02	□□□□□ -1.28
RPN5	YDL147W	REC104	P33323	182 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	CCM1	P48237	864 aa	Predicted RBP	7.01	□□□□□ -1.29
RPN5	YDL147W	YGR237C	P50089	785 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	COQ4	O13525	335 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	RPS4A	P0CX35	261 aa	Known RBP	7.01	□□□□□ -1.29
RPN5	YDL147W	RPS4B	P0CX36	261 aa	Known RBP	7.01	□□□□□ -1.29
RPN5	YDL147W	VBA3	P25594	458 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	RSC6	P25632	483 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	CDC12	P32468	407 aa	Known RBP	7.01	□□□□□ -1.29
RPN5	YDL147W	YSC84	P32793	468 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	UGA2	P38067	497 aa		7.01	□□□□□ -1.29
RPN5	YDL147W	NOP2	P40991	618 aa	Known RBP	7.01	□□□□□ -1.29
RPN5	YDL147W	PUS7	Q08647	676 aa	Known RBP	7.01	□□□□□ -1.29
RPN5	YDL147W	NUP145	P49687	1317 aa		7	□□□□□ -1.29
RPN5	YDL147W	MRC1	P25588	1096 aa		7	□□□□□ -1.29
RPN5	YDL147W	SFA1	P32771	386 aa		7	□□□□□ -1.29
RPN5	YDL147W	SLA2	P33338	968 aa		7	□□□□□ -1.29
RPN5	YDL147W	GRX7	P38068	203 aa		7	□□□□□ -1.29
RPN5	YDL147W	ALT1	P52893	592 aa		7	□□□□□ -1.29
RPN5	YDL147W	SDA1	P53313	767 aa	Known RBP	7	□□□□□ -1.29
RPN5	YDL147W	THI73	Q07904	523 aa		7	□□□□□ -1.29
RPN5	YDL147W	MEF1	P25039	761 aa		6.99	□□□□□ -1.29
RPN5	YDL147W	TOK1	P40310	691 aa		6.99	□□□□□ -1.29
RPN5	YDL147W	AI1	P03875	834 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	TOP1	P04786	769 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	CCZ1	P38273	704 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	NIT3	P49954	291 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	DAM1	P53267	343 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	UME1	Q03010	460 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	YLL058W	Q12198	575 aa		6.98	□□□□□ -1.29
RPN5	YDL147W	HRQ1	Q05549	1077 aa		6.97	□□□□□ -1.29
RPN5	YDL147W	SPC29	P33419	253 aa		6.96	□□□□□ -1.3
RPN5	YDL147W	PAF1	P38351	445 aa		6.96	□□□□□ -1.3
RPN5	YDL147W	ATG36	P46983	293 aa		6.96	□□□□□ -1.3
RPN5	YDL147W	BUD9	P53226	547 aa		6.96	□□□□□ -1.3
RPN5	YDL147W	FOL1	P53848	824 aa		6.96	□□□□□ -1.3
RPN5	YDL147W	ALO1	P54783	526 aa	Known RBP	6.96	□□□□□ -1.3
RPN5	YDL147W	GAS5	Q08193	484 aa		6.96	□□□□□ -1.3
RPN5	YDL147W	FAP7	Q12055	197 aa	Predicted RBP	6.96	□□□□□ -1.3
RPN5	YDL147W	CDC9	P04819	755 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	YEL1	P34225	687 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	YKL151C	P36059	337 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	YKR078W	P36158	585 aa	Known RBP	6.95	□□□□□ -1.3
RPN5	YDL147W	PIK1	P39104	1066 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	ICP55	P40051	511 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	GYP7	P48365	746 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	BUL2	Q03758	920 aa	Known RBP	6.95	□□□□□ -1.3
RPN5	YDL147W	YDR514C	Q04408	483 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	RSB1	Q08417	382 aa		6.95	□□□□□ -1.3
RPN5	YDL147W	SRD1	P09007	221 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	SNF5	P18480	905 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	NPP1	P25353	742 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	AFR1	P33304	620 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	STO1	P34160	861 aa	Known RBP	6.94	□□□□□ -1.3
RPN5	YDL147W	BAP2	P38084	609 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	YHL012W	P38709	493 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	SEC26	P41810	973 aa	Known RBP	6.94	□□□□□ -1.3
RPN5	YDL147W	YGR283C	P53336	341 aa	Predicted RBP	6.94	□□□□□ -1.3
RPN5	YDL147W	YLR001C	Q07895	862 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	MDM38	Q08179	573 aa		6.94	□□□□□ -1.3
RPN5	YDL147W	NBA1	Q08229	501 aa	Known RBP	6.94	□□□□□ -1.3
RPN5	YDL147W	BI4	P03879	638 aa		6.93	□□□□□ -1.3
RPN5	YDL147W	RAD18	P10862	487 aa		6.93	□□□□□ -1.3
RPN5	YDL147W	CDC48	P25694	835 aa	Known RBP	6.93	□□□□□ -1.3
RPN5	YDL147W	TYS1	P36421	394 aa	Known RBP	6.93	□□□□□ -1.3
RPN5	YDL147W	ERT1	P38140	529 aa		6.93	□□□□□ -1.3
RPN5	YDL147W	YER158C	P40095	573 aa		6.93	□□□□□ -1.3
RPN5	YDL147W	SBE2	P42223	864 aa	Known RBP	6.93	□□□□□ -1.3
RPN5	YDL147W	YFL054C	P43549	646 aa		6.93	□□□□□ -1.3
RPN5	YDL147W	TMA17	Q12513	150 aa		6.93	□□□□□ -1.3
RPN5	YDL147W	AI3	P03877	415 aa		6.92	□□□□□ -1.3
RPN5	YDL147W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6.92	□□□□□ -1.3	not detected
RPN5	YDL147W	MDL2	P33311	773 aa		6.92	□□□□□ -1.3
RPN5	YDL147W	MTC2	P34246	357 aa		6.92	□□□□□ -1.3
RPN5	YDL147W	EMC3	P36039	253 aa		6.92	□□□□□ -1.3
RPN5	YDL147W	YBR238C	P38330	731 aa	Known RBP	6.92	□□□□□ -1.3
RPN5	YDL147W	NUG1	P40010	520 aa	Known RBP	6.92	□□□□□ -1.3

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms