RNA–Protein interactions for RNA: ENST00000639088.1

SLC35A3-214, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5

Gene SLC35A3, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-214ENST00000639088 RC3H1Q5TC82 1133 aaKnown RBP25.74■■□□□ 1.71
SLC35A3-214ENST00000639088 CNTNAP4Q9C0A0 1308 aa25.74■■□□□ 1.71
SLC35A3-214ENST00000639088 TJP1Q07157 1748 aa25.73■■□□□ 1.71
SLC35A3-214ENST00000639088 PHF14O94880 888 aa25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 CYP19A1P11511 503 aaPredicted RBP25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 TRMT2AQ8IZ69 625 aaKnown RBP25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 RTCBQ9Y3I0 505 aaKnown RBP25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 MSH5O43196 834 aa25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 DUSP27Q5VZP5 1158 aa25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 FLAD1Q8NFF5 587 aa25.72■■□□□ 1.71
SLC35A3-214ENST00000639088 CICQ96RK0 1608 aaPredicted RBP25.71■■□□□ 1.71
SLC35A3-214ENST00000639088 PNPLA7Q6ZV29 1317 aa25.71■■□□□ 1.71
SLC35A3-214ENST00000639088 PRAMEF22A3QJZ6 481 aa25.7■■□□□ 1.7
SLC35A3-214ENST00000639088 EXOSC9Q06265 439 aaKnown RBP25.7■■□□□ 1.7
SLC35A3-214ENST00000639088 CCDC87Q9NVE4 849 aa25.7■■□□□ 1.7
SLC35A3-214ENST00000639088 COL5A3P25940 1745 aaPredicted RBP25.69■■□□□ 1.7
SLC35A3-214ENST00000639088 SSFA2P28290 1259 aa25.69■■□□□ 1.7
SLC35A3-214ENST00000639088 C8orf58Q8NAV2 365 aa25.69■■□□□ 1.7
SLC35A3-214ENST00000639088 USP16Q9Y5T5 823 aa25.69■■□□□ 1.7
SLC35A3-214ENST00000639088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.68■■□□□ 1.7
SLC35A3-214ENST00000639088 GIGYF1O75420 1035 aaPredicted RBP25.68■■□□□ 1.7
SLC35A3-214ENST00000639088 RPS6KA4O75676 772 aa25.68■■□□□ 1.7
SLC35A3-214ENST00000639088 INTS5Q6P9B9 1019 aaKnown RBP25.68■■□□□ 1.7
SLC35A3-214ENST00000639088 PDGFDQ9GZP0 370 aaPredicted RBP25.68■■□□□ 1.7
SLC35A3-214ENST00000639088 LAMB4A4D0S4 1761 aa25.68■■□□□ 1.7
SLC35A3-214ENST00000639088 ELL2O00472 640 aaPredicted RBP25.67■■□□□ 1.7
SLC35A3-214ENST00000639088 TRAPPC3LQ5T215 181 aa25.67■■□□□ 1.7
SLC35A3-214ENST00000639088 SMIM5Q71RC9 77 aa25.67■■□□□ 1.7
SLC35A3-214ENST00000639088 COL23A1Q86Y22 540 aaPredicted RBP25.67■■□□□ 1.7
SLC35A3-214ENST00000639088 CANXP27824 592 aaKnown RBP25.66■■□□□ 1.7
SLC35A3-214ENST00000639088 TSPYL6Q8N831 410 aa25.66■■□□□ 1.7
SLC35A3-214ENST00000639088 ZBTB1Q9Y2K1 713 aa25.66■■□□□ 1.7
SLC35A3-214ENST00000639088 AMIGO3Q86WK7 504 aa25.66■■□□□ 1.7
SLC35A3-214ENST00000639088 TWISTNBQ3B726 338 aaPredicted RBP25.64■■□□□ 1.69
SLC35A3-214ENST00000639088 NPM2Q86SE8 214 aaKnown RBP25.64■■□□□ 1.69
SLC35A3-214ENST00000639088 ZBTB7AO95365 584 aa25.63■■□□□ 1.69
SLC35A3-214ENST00000639088 A1BGP04217 495 aa25.63■■□□□ 1.69
SLC35A3-214ENST00000639088 ADRA2BP18089 450 aa25.63■■□□□ 1.69
SLC35A3-214ENST00000639088 SLC16A10Q8TF71 515 aa25.63■■□□□ 1.69
SLC35A3-214ENST00000639088 ZNF330Q9Y3S2 320 aaPredicted RBP25.63■■□□□ 1.69
SLC35A3-214ENST00000639088 HOXB7P09629 217 aa25.62■■□□□ 1.69
SLC35A3-214ENST00000639088 RFC4P35249 363 aa25.62■■□□□ 1.69
SLC35A3-214ENST00000639088 ARHGEF1Q92888 912 aaKnown RBP25.62■■□□□ 1.69
SLC35A3-214ENST00000639088 QSER1Q2KHR3 1735 aa25.61■■□□□ 1.69
SLC35A3-214ENST00000639088 EIF2S2P20042 333 aaKnown RBP25.61■■□□□ 1.69
SLC35A3-214ENST00000639088 TUBGCP6Q96RT7 1819 aa25.61■■□□□ 1.69
SLC35A3-214ENST00000639088 UBR3Q6ZT12 1888 aa25.61■■□□□ 1.69
SLC35A3-214ENST00000639088 MTFR1LQ9H019 292 aa25.6■■□□□ 1.69
SLC35A3-214ENST00000639088 MYH14Q7Z406 1995 aaKnown RBP25.6■■□□□ 1.69
SLC35A3-214ENST00000639088 NECTIN2Q92692 538 aa25.6■■□□□ 1.69
SLC35A3-214ENST00000639088 ATF5Q9Y2D1 282 aaPredicted RBP25.6■■□□□ 1.69
SLC35A3-214ENST00000639088 SOS1Q07889 1333 aaPredicted RBP25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 CASZ1Q86V15 1759 aa25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 VAMP4O75379 141 aa25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 IL6STP40189 918 aaPredicted RBP25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 PIP4K2AP48426 406 aaPredicted RBP25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 HDGFL1Q5TGJ6 251 aa25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 SPON1Q9HCB6 807 aa25.59■■□□□ 1.69
SLC35A3-214ENST00000639088 ARXQ96QS3 562 aa25.58■■□□□ 1.69
SLC35A3-214ENST00000639088 COL15A1P39059 1388 aa25.57■■□□□ 1.68
SLC35A3-214ENST00000639088 A0A087WZG4 1122 aa25.56■■□□□ 1.68
SLC35A3-214ENST00000639088 EIF5P55010 431 aaKnown RBP25.56■■□□□ 1.68
SLC35A3-214ENST00000639088 ZPR1O75312 459 aa25.55■■□□□ 1.68
SLC35A3-214ENST00000639088 MSL1Q68DK7 614 aa25.54■■□□□ 1.68
SLC35A3-214ENST00000639088 NBPF26B4DH59 902 aa25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 TCERG1O14776 1098 aaKnown RBP25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 MYL6BP14649 208 aa25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 NBPF10Q6P3W6 841 aaKnown RBP25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 NBPF15Q8N660 670 aa25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 CT47B1P0C2W7 299 aaPredicted RBP25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 CHPF2Q9P2E5 772 aa25.53■■□□□ 1.68
SLC35A3-214ENST00000639088 ERBB4Q15303 1308 aa25.52■■□□□ 1.68
SLC35A3-214ENST00000639088 POLD1P28340 1107 aa25.52■■□□□ 1.68
SLC35A3-214ENST00000639088 CCDC30Q5VVM6 783 aa25.52■■□□□ 1.68
SLC35A3-214ENST00000639088 SRP68Q9UHB9 627 aaKnown RBP25.52■■□□□ 1.68
SLC35A3-214ENST00000639088 USP42Q9H9J4 1324 aaKnown RBP25.51■■□□□ 1.67
SLC35A3-214ENST00000639088 USPL1Q5W0Q7 1092 aa25.51■■□□□ 1.67
SLC35A3-214ENST00000639088 CHMP4AQ9BY43 222 aa25.51■■□□□ 1.67
SLC35A3-214ENST00000639088 NARFQ9UHQ1 456 aa25.51■■□□□ 1.67
SLC35A3-214ENST00000639088 TBC1D2BQ9UPU7 963 aa25.51■■□□□ 1.67
SLC35A3-214ENST00000639088 ANXA1P04083 346 aa25.5■■□□□ 1.67
SLC35A3-214ENST00000639088 PROSER3Q2NL68 480 aa25.5■■□□□ 1.67
SLC35A3-214ENST00000639088 DZIP3Q86Y13 1208 aaKnown RBP25.5■■□□□ 1.67
SLC35A3-214ENST00000639088 NLGN1Q8N2Q7 840 aa25.5■■□□□ 1.67
SLC35A3-214ENST00000639088 GYS1P13807 737 aa25.49■■□□□ 1.67
SLC35A3-214ENST00000639088 PDIA6Q15084 440 aa25.49■■□□□ 1.67
SLC35A3-214ENST00000639088 STK31Q9BXU1 1019 aa25.48■■□□□ 1.67
SLC35A3-214ENST00000639088 DBF4Q9UBU7 674 aaPredicted RBP25.48■■□□□ 1.67
SLC35A3-214ENST00000639088 PPP1R1BQ9UD71 204 aaPredicted RBP25.48■■□□□ 1.67
SLC35A3-214ENST00000639088 ZNF428Q96B54 188 aa25.47■■□□□ 1.67
SLC35A3-214ENST00000639088 BCL2L13Q9BXK5 485 aa25.47■■□□□ 1.67
SLC35A3-214ENST00000639088 DDX21Q9NR30 783 aaKnown RBP eCLIP25.47■■□□□ 1.67
SLC35A3-214ENST00000639088 PTGER2P43116 358 aa25.47■■□□□ 1.67
SLC35A3-214ENST00000639088 SSH1Q8WYL5 1049 aa25.47■■□□□ 1.67
SLC35A3-214ENST00000639088 C4AP0C0L4 1744 aa25.46■■□□□ 1.67
SLC35A3-214ENST00000639088 RARSP54136 660 aaKnown RBP25.46■■□□□ 1.67
SLC35A3-214ENST00000639088 LRP10Q7Z4F1 713 aa25.45■■□□□ 1.66
SLC35A3-214ENST00000639088 SLC4A2P04920 1241 aa25.44■■□□□ 1.66
SLC35A3-214ENST00000639088 FKBP8Q14318 412 aa25.44■■□□□ 1.66
SLC35A3-214ENST00000639088 ALDH1L2Q3SY69 923 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms