RNA–Protein interactions for RNA: ENST00000638787.1

NECAP1-212, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,067 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-212ENST00000638787 CHL1O00533 1208 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 RPS6KA4O75676 772 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 STARD3NLO95772 234 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 SNRPA1P09661 255 aaKnown RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 INTS5Q6P9B9 1019 aaKnown RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
NECAP1-212ENST00000638787 RTCBQ9Y3I0 505 aaKnown RBP11.58□□□□□ -0.56
NECAP1-212ENST00000638787 LAMB4A4D0S4 1761 aa11.57□□□□□ -0.56
NECAP1-212ENST00000638787 ZBTB7AO95365 584 aa11.57□□□□□ -0.56
NECAP1-212ENST00000638787 CFAP44Q96MT7 982 aa11.57□□□□□ -0.56
NECAP1-212ENST00000638787 SALL2Q9Y467 1007 aaPredicted RBP11.57□□□□□ -0.56
NECAP1-212ENST00000638787 LRP5O75197 1615 aa11.57□□□□□ -0.56
NECAP1-212ENST00000638787 ZNF853P0CG23 659 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 GIGYF1O75420 1035 aaPredicted RBP11.56□□□□□ -0.56
NECAP1-212ENST00000638787 GNAI1P63096 354 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 NGEFQ8N5V2 710 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 SLC16A10Q8TF71 515 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 MTFR1LQ9H019 292 aa11.56□□□□□ -0.56
NECAP1-212ENST00000638787 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
NECAP1-212ENST00000638787 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-212ENST00000638787 TRAPPC3LQ5T215 181 aa11.55□□□□□ -0.56
NECAP1-212ENST00000638787 SPON1Q9HCB6 807 aa11.55□□□□□ -0.56
NECAP1-212ENST00000638787 MBIPQ9NS73 344 aa11.55□□□□□ -0.56
NECAP1-212ENST00000638787 CANXP27824 592 aaKnown RBP11.55□□□□□ -0.56
NECAP1-212ENST00000638787 ARHGEF1Q92888 912 aaKnown RBP11.55□□□□□ -0.56
NECAP1-212ENST00000638787 ATF5Q9Y2D1 282 aaPredicted RBP11.55□□□□□ -0.56
NECAP1-212ENST00000638787 IL16Q14005 1332 aa11.54□□□□□ -0.56
NECAP1-212ENST00000638787 A1BGP04217 495 aa11.54□□□□□ -0.56
NECAP1-212ENST00000638787 COL15A1P39059 1388 aa11.54□□□□□ -0.56
NECAP1-212ENST00000638787 COL24A1Q17RW2 1714 aa11.54□□□□□ -0.56
NECAP1-212ENST00000638787 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
NECAP1-212ENST00000638787 RFC4P35249 363 aa11.53□□□□□ -0.56
NECAP1-212ENST00000638787 KRT24Q2M2I5 525 aa11.53□□□□□ -0.56
NECAP1-212ENST00000638787 MSL1Q68DK7 614 aa11.53□□□□□ -0.56
NECAP1-212ENST00000638787 PTGER2P43116 358 aa11.52□□□□□ -0.57
NECAP1-212ENST00000638787 PIP4K2AP48426 406 aaPredicted RBP11.52□□□□□ -0.57
NECAP1-212ENST00000638787 EIF5P55010 431 aaKnown RBP11.52□□□□□ -0.57
NECAP1-212ENST00000638787 IL6STP40189 918 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-212ENST00000638787 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
NECAP1-212ENST00000638787 SGIP1Q9BQI5 828 aa11.51□□□□□ -0.57
NECAP1-212ENST00000638787 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-212ENST00000638787 ZNF521Q96K83 1311 aa11.51□□□□□ -0.57
NECAP1-212ENST00000638787 USP42Q9H9J4 1324 aaKnown RBP11.51□□□□□ -0.57
NECAP1-212ENST00000638787 NBPF26B4DH59 902 aa11.51□□□□□ -0.57
NECAP1-212ENST00000638787 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
NECAP1-212ENST00000638787 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
NECAP1-212ENST00000638787 SRP68Q9UHB9 627 aaKnown RBP11.51□□□□□ -0.57
NECAP1-212ENST00000638787 A0A087WZG4 1122 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 HOXB7P09629 217 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 EIF2S2P20042 333 aaKnown RBP11.5□□□□□ -0.57
NECAP1-212ENST00000638787 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 ZPR1O75312 459 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 GYS1P13807 737 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 POLD1P28340 1107 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 DUSP27Q5VZP5 1158 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
NECAP1-212ENST00000638787 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
NECAP1-212ENST00000638787 ERBB4Q15303 1308 aa11.49□□□□□ -0.57
NECAP1-212ENST00000638787 FANCIQ9NVI1 1328 aa11.49□□□□□ -0.57
NECAP1-212ENST00000638787 USPL1Q5W0Q7 1092 aa11.49□□□□□ -0.57
NECAP1-212ENST00000638787 SPINK5Q9NQ38 1064 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-212ENST00000638787 SCN7AQ01118 1682 aa11.49□□□□□ -0.57
NECAP1-212ENST00000638787 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 NLGN1Q8N2Q7 840 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 C8orf58Q8NAV2 365 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 NECTIN2Q92692 538 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 PPP1R1BQ9UD71 204 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-212ENST00000638787 BCORQ6W2J9 1755 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 ELL2O00472 640 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-212ENST00000638787 MYL6BP14649 208 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 DZIP3Q86Y13 1208 aaKnown RBP11.48□□□□□ -0.57
NECAP1-212ENST00000638787 ARXQ96QS3 562 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 MYH16Q9H6N6 1097 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
NECAP1-212ENST00000638787 FKBP8Q14318 412 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 PDIA6Q15084 440 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 CAMTA2O94983 1202 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 MMP10P09238 476 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 GOLGA2Q08379 1002 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 PROSER3Q2NL68 480 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 TSPYL6Q8N831 410 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 BCL2L12Q9HB09 334 aa11.47□□□□□ -0.57
NECAP1-212ENST00000638787 ANXA1P04083 346 aa11.46□□□□□ -0.57
NECAP1-212ENST00000638787 LRP10Q7Z4F1 713 aa11.46□□□□□ -0.57
NECAP1-212ENST00000638787 CHPF2Q9P2E5 772 aa11.46□□□□□ -0.57
NECAP1-212ENST00000638787 TWISTNBQ3B726 338 aaPredicted RBP11.45□□□□□ -0.58
NECAP1-212ENST00000638787 DDX21Q9NR30 783 aaKnown RBP eCLIP11.45□□□□□ -0.58
NECAP1-212ENST00000638787 E9PSI1 815 aa11.45□□□□□ -0.58
NECAP1-212ENST00000638787 HNRNPUQ00839 825 aaKnown RBP eCLIP11.45□□□□□ -0.58
NECAP1-212ENST00000638787 EXOSC9Q06265 439 aaKnown RBP11.45□□□□□ -0.58
NECAP1-212ENST00000638787 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
NECAP1-212ENST00000638787 TTLL7Q6ZT98 887 aa11.44□□□□□ -0.58
NECAP1-212ENST00000638787 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
NECAP1-212ENST00000638787 PARP3Q9Y6F1 533 aa11.44□□□□□ -0.58
NECAP1-212ENST00000638787 MAP3K15Q6ZN16 1313 aa11.44□□□□□ -0.58
NECAP1-212ENST00000638787 TM4SF1P30408 202 aa11.44□□□□□ -0.58
NECAP1-212ENST00000638787 DDR1Q08345 913 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms