RNA–Protein interactions for RNA: ENST00000638154.2

TCF4-290, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 7,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-290ENST00000638154 H0YC42 278 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 CCDC6Q16204 474 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 SPOCK3Q9BQ16 436 aa6.3□□□□□ -1.4
TCF4-290ENST00000638154 SMTNL1A8MU46 457 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 XRCC6P12956 609 aaKnown RBP eCLIP6.29□□□□□ -1.4
TCF4-290ENST00000638154 PTPN14Q15678 1187 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 TBC1D10BQ4KMP7 808 aaPredicted RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 C16orf45Q96MC5 204 aaPredicted RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 VCXQ9H320 206 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 RPSAP08865 295 aaKnown RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 PDE6BP35913 854 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 PPM1FP49593 454 aaPredicted RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 CHCHD4Q8N4Q1 142 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 TSG101Q99816 390 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 ST18O60284 1047 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 KCNA1Q09470 495 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 MAP7Q14244 749 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 DONSONQ9NYP3 566 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 VPS18Q9P253 973 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 RCAN3Q9UKA8 241 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 ZNF397Q8NF99 534 aaPredicted RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 CCDC148Q8NFR7 591 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 TBCAO75347 108 aaKnown RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 SPECC1Q5M775 1068 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 GCOM1H8Y6P7 765 aaPredicted RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 HNRNPCP07910 306 aaKnown RBP eCLIP6.29□□□□□ -1.4
TCF4-290ENST00000638154 MYZAPP0CAP1 466 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 MCM4P33991 863 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 LRRFIP1Q32MZ4 808 aaKnown RBP6.29□□□□□ -1.4
TCF4-290ENST00000638154 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 NANOGNBQ7Z5D8 188 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 WASHC2AQ641Q2 1341 aa6.29□□□□□ -1.4
TCF4-290ENST00000638154 CEBPZQ03701 1054 aaKnown RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 GRAMD4Q6IC98 578 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 MSANTD4Q8NCY6 345 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 FAF1Q9UNN5 650 aaPredicted RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 UNC45AQ9H3U1 944 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 C6orf203Q9P0P8 240 aaPredicted RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 TMA7Q9Y2S6 64 aaKnown RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 TSC22D4Q9Y3Q8 395 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 LONRF3Q496Y0 759 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 CCDC38Q502W7 563 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 TCERG1LQ5VWI1 586 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 DDX46Q7L014 1031 aaKnown RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 GBP5Q96PP8 586 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 BAG1Q99933 345 aaPredicted RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 HELLSQ9NRZ9 838 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 KINO60870 393 aaKnown RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 PPFIA2O75334 1257 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 TACC1O75410 805 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 KRT7P08729 469 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 CCDC158Q5M9N0 1113 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 PPP1R14BQ96C90 147 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 BICD1Q96G01 975 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
TCF4-290ENST00000638154 CETN3O15182 167 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 GJA8P48165 433 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 CTAGE6Q86UF2 777 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 SIN3AQ96ST3 1273 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 TSC22D3Q99576 134 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 ATP6V0A1Q93050 837 aa6.28□□□□□ -1.4
TCF4-290ENST00000638154 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
TCF4-290ENST00000638154 SPECC1L-ADORA2AF8WAN1 911 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 KIF22Q14807 665 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 BICD2Q8TD16 824 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 IWS1Q96ST2 819 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 TMEM165Q9HC07 324 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 ETAA1Q9NY74 926 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 PAXBP1Q9Y5B6 917 aa6.27□□□□□ -1.4
TCF4-290ENST00000638154 MAPK8IP3Q9UPT6 1336 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 NDC80O14777 642 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 PCYT1AP49585 367 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 HHATQ5VTY9 493 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 CCDC80Q76M96 950 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 HDGFL2Q7Z4V5 671 aaPredicted RBP6.27□□□□□ -1.41
TCF4-290ENST00000638154 SIX5Q8N196 739 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 hCG_2014768A0A024R1R8 64 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 SMAPO00193 183 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 SASH1O94885 1247 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 KIAA0825Q8IV33 1275 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 TMEM57Q8N5G2 664 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 KCNH8Q96L42 1107 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 LRRD1A4D1F6 860 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
TCF4-290ENST00000638154 BRD1O95696 1058 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 VCAM1P19320 739 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 NBPF10Q6P3W6 841 aaKnown RBP6.27□□□□□ -1.41
TCF4-290ENST00000638154 RRP15Q9Y3B9 282 aaKnown RBP6.27□□□□□ -1.41
TCF4-290ENST00000638154 MATR3P43243 847 aaKnown RBP eCLIP6.27□□□□□ -1.415e-7■■■■■ 29.7
TCF4-290ENST00000638154 NLRP5P59047 1200 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 HLTFQ14527 1009 aaKnown RBP eCLIP6.27□□□□□ -1.41
TCF4-290ENST00000638154 NEK1Q96PY6 1258 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 TRIM35Q9UPQ4 493 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 KRI1Q8N9T8 703 aaKnown RBP6.27□□□□□ -1.41
TCF4-290ENST00000638154 UBA5Q9GZZ9 404 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 MTUS1Q9ULD2 1270 aa6.27□□□□□ -1.41
TCF4-290ENST00000638154 DNAJC8O75937 253 aaPredicted RBP6.26□□□□□ -1.41
TCF4-290ENST00000638154 POLR2FP61218 127 aaKnown RBP6.26□□□□□ -1.41
TCF4-290ENST00000638154 CCDC144BQ3MJ40 725 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms