RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 SRP68Q9UHB9 627 aaKnown RBP16.04■□□□□ 0.16
EFHC1-239ENST00000638140 ZBTB1Q9Y2K1 713 aa16.04■□□□□ 0.16
EFHC1-239ENST00000638140 USP16Q9Y5T5 823 aa16.04■□□□□ 0.16
EFHC1-239ENST00000638140 PRAMEF22A3QJZ6 481 aa16.03■□□□□ 0.16
EFHC1-239ENST00000638140 A1BGP04217 495 aa16.03■□□□□ 0.16
EFHC1-239ENST00000638140 MYH14Q7Z406 1995 aaKnown RBP16.03■□□□□ 0.16
EFHC1-239ENST00000638140 MMP10P09238 476 aa16.02■□□□□ 0.16
EFHC1-239ENST00000638140 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
EFHC1-239ENST00000638140 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.16
EFHC1-239ENST00000638140 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.15
EFHC1-239ENST00000638140 SOS1Q07889 1333 aaPredicted RBP16.01■□□□□ 0.15
EFHC1-239ENST00000638140 DCAF8L1A6NGE4 600 aa16.01■□□□□ 0.15
EFHC1-239ENST00000638140 ZPR1O75312 459 aa16.01■□□□□ 0.15
EFHC1-239ENST00000638140 NLGN2Q8NFZ4 835 aa16.01■□□□□ 0.15
EFHC1-239ENST00000638140 TJP1Q07157 1748 aa16.01■□□□□ 0.15
EFHC1-239ENST00000638140 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
EFHC1-239ENST00000638140 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
EFHC1-239ENST00000638140 FKBP8Q14318 412 aa16■□□□□ 0.15
EFHC1-239ENST00000638140 USPL1Q5W0Q7 1092 aa16■□□□□ 0.15
EFHC1-239ENST00000638140 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
EFHC1-239ENST00000638140 SIPA1L3O60292 1781 aaPredicted RBP16■□□□□ 0.15
EFHC1-239ENST00000638140 APAF1O14727 1248 aa15.99■□□□□ 0.15
EFHC1-239ENST00000638140 EIF4A1P60842 406 aaKnown RBP15.99■□□□□ 0.15
EFHC1-239ENST00000638140 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
EFHC1-239ENST00000638140 ZNF330Q9Y3S2 320 aaPredicted RBP15.99■□□□□ 0.15
EFHC1-239ENST00000638140 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
EFHC1-239ENST00000638140 COL24A1Q17RW2 1714 aa15.99■□□□□ 0.15
EFHC1-239ENST00000638140 PIP4K2AP48426 406 aaPredicted RBP15.98■□□□□ 0.15
EFHC1-239ENST00000638140 MRS2Q9HD23 443 aa15.98■□□□□ 0.15
EFHC1-239ENST00000638140 NARFQ9UHQ1 456 aa15.98■□□□□ 0.15
EFHC1-239ENST00000638140 UBR2Q8IWV8 1755 aa15.98■□□□□ 0.15
EFHC1-239ENST00000638140 GIGYF1O75420 1035 aaPredicted RBP15.97■□□□□ 0.15
EFHC1-239ENST00000638140 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
EFHC1-239ENST00000638140 TBC1D2BQ9UPU7 963 aa15.97■□□□□ 0.15
EFHC1-239ENST00000638140 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
EFHC1-239ENST00000638140 DLG5Q8TDM6 1919 aa15.97■□□□□ 0.15
EFHC1-239ENST00000638140 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
EFHC1-239ENST00000638140 TM4SF1P30408 202 aa15.96■□□□□ 0.15
EFHC1-239ENST00000638140 IL6STP40189 918 aaPredicted RBP15.96■□□□□ 0.15
EFHC1-239ENST00000638140 NPM2Q86SE8 214 aaKnown RBP15.96■□□□□ 0.15
EFHC1-239ENST00000638140 LAS1LQ9Y4W2 734 aaKnown RBP15.96■□□□□ 0.15
EFHC1-239ENST00000638140 COL15A1P39059 1388 aa15.96■□□□□ 0.15
EFHC1-239ENST00000638140 A0A087WZG4 1122 aa15.95■□□□□ 0.14
EFHC1-239ENST00000638140 GPR162Q16538 588 aa15.95■□□□□ 0.14
EFHC1-239ENST00000638140 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
EFHC1-239ENST00000638140 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
EFHC1-239ENST00000638140 SENP3-EIF4A1A0A087X0R7 540 aa15.94■□□□□ 0.14
EFHC1-239ENST00000638140 NBPF26B4DH59 902 aa15.94■□□□□ 0.14
EFHC1-239ENST00000638140 NBPF10Q6P3W6 841 aaKnown RBP15.94■□□□□ 0.14
EFHC1-239ENST00000638140 NBPF15Q8N660 670 aa15.94■□□□□ 0.14
EFHC1-239ENST00000638140 BABAM1Q9NWV8 329 aa15.94■□□□□ 0.14
EFHC1-239ENST00000638140 CHL1O00533 1208 aa15.93■□□□□ 0.14
EFHC1-239ENST00000638140 DDR1Q08345 913 aa15.93■□□□□ 0.14
EFHC1-239ENST00000638140 NFIXQ14938 502 aa15.93■□□□□ 0.14
EFHC1-239ENST00000638140 POLRMTO00411 1230 aaKnown RBP15.92■□□□□ 0.14
EFHC1-239ENST00000638140 BICDL1Q6ZP65 573 aa15.92■□□□□ 0.14
EFHC1-239ENST00000638140 DZIP3Q86Y13 1208 aaKnown RBP15.92■□□□□ 0.14
EFHC1-239ENST00000638140 GOLGB1Q14789 3259 aaKnown RBP15.92■□□□□ 0.14
EFHC1-239ENST00000638140 NGEFQ8N5V2 710 aa15.91■□□□□ 0.14
EFHC1-239ENST00000638140 WWC3Q9ULE0 1092 aa15.91■□□□□ 0.14
EFHC1-239ENST00000638140 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
EFHC1-239ENST00000638140 CAMTA2O94983 1202 aa15.9■□□□□ 0.14
EFHC1-239ENST00000638140 EIF2S2P20042 333 aaKnown RBP15.9■□□□□ 0.14
EFHC1-239ENST00000638140 TBC1D9BQ66K14 1250 aa15.9■□□□□ 0.14
EFHC1-239ENST00000638140 C4AP0C0L4 1744 aa15.9■□□□□ 0.14
EFHC1-239ENST00000638140 SERPINB2P05120 415 aa15.89■□□□□ 0.13
EFHC1-239ENST00000638140 MYL6BP14649 208 aa15.89■□□□□ 0.13
EFHC1-239ENST00000638140 YBX3P16989 372 aaKnown RBP eCLIP15.89■□□□□ 0.13
EFHC1-239ENST00000638140 TGFB2P61812 414 aa15.89■□□□□ 0.13
EFHC1-239ENST00000638140 KRT24Q2M2I5 525 aa15.89■□□□□ 0.13
EFHC1-239ENST00000638140 CFAP44Q96MT7 982 aa15.89■□□□□ 0.13
EFHC1-239ENST00000638140 FAM9BQ8IZU0 186 aa15.88■□□□□ 0.13
EFHC1-239ENST00000638140 NECTIN2Q92692 538 aa15.88■□□□□ 0.13
EFHC1-239ENST00000638140 ZNF853P0CG23 659 aa15.87■□□□□ 0.13
EFHC1-239ENST00000638140 UTRNP46939 3433 aa15.86■□□□□ 0.13
EFHC1-239ENST00000638140 DPEP1P16444 411 aa15.86■□□□□ 0.13
EFHC1-239ENST00000638140 KCNA3P22001 575 aa15.86■□□□□ 0.13
EFHC1-239ENST00000638140 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
EFHC1-239ENST00000638140 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
EFHC1-239ENST00000638140 CLEC4GQ6UXB4 293 aa15.86■□□□□ 0.13
EFHC1-239ENST00000638140 SETDB2Q96T68 719 aa15.86■□□□□ 0.13
EFHC1-239ENST00000638140 MBIPQ9NS73 344 aa15.86■□□□□ 0.13
EFHC1-239ENST00000638140 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
EFHC1-239ENST00000638140 GRIN3BO60391 1043 aa15.85■□□□□ 0.13
EFHC1-239ENST00000638140 YY1P25490 414 aa15.85■□□□□ 0.13
EFHC1-239ENST00000638140 PDIA6Q15084 440 aa15.85■□□□□ 0.13
EFHC1-239ENST00000638140 HLFQ16534 295 aa15.85■□□□□ 0.13
EFHC1-239ENST00000638140 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
EFHC1-239ENST00000638140 GNAI1P63096 354 aa15.84■□□□□ 0.13
EFHC1-239ENST00000638140 TTLL7Q6ZT98 887 aa15.84■□□□□ 0.13
EFHC1-239ENST00000638140 WWC1Q8IX03 1113 aa15.84■□□□□ 0.13
EFHC1-239ENST00000638140 CCDC24Q8N4L8 307 aa15.84■□□□□ 0.13
EFHC1-239ENST00000638140 IFT57Q9NWB7 429 aa15.84■□□□□ 0.13
EFHC1-239ENST00000638140 C10orf71Q711Q0 1435 aa15.84■□□□□ 0.13
EFHC1-239ENST00000638140 ELL2O00472 640 aaPredicted RBP15.83■□□□□ 0.12
EFHC1-239ENST00000638140 ANXA1P04083 346 aa15.83■□□□□ 0.12
EFHC1-239ENST00000638140 CHRNA5P30532 468 aa15.83■□□□□ 0.12
EFHC1-239ENST00000638140 CCDC27Q2M243 656 aa15.83■□□□□ 0.12
EFHC1-239ENST00000638140 PROSER3Q2NL68 480 aa15.83■□□□□ 0.12
EFHC1-239ENST00000638140 DUSP27Q5VZP5 1158 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms