RNA–Protein interactions for RNA: ENST00000637297.1

CACNA1A-239, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-239ENST00000637297 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 CHL1O00533 1208 aa11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 RPS6KA4O75676 772 aa11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 CYP19A1P11511 503 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 CANXP27824 592 aaKnown RBP11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 SSFA2P28290 1259 aa11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 IFT57Q9NWB7 429 aa11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
CACNA1A-239ENST00000637297 RFC4P35249 363 aa11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 COL23A1Q86Y22 540 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 WDR63Q8IWG1 891 aa11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 ARXQ96QS3 562 aa11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 USP16Q9Y5T5 823 aa11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
CACNA1A-239ENST00000637297 GIGYF1O75420 1035 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 ZBTB7AO95365 584 aa11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 ADRA2BP18089 450 aa11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 INTS5Q6P9B9 1019 aaKnown RBP11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 SMIM5Q71RC9 77 aa11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 PDGFDQ9GZP0 370 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 SPON1Q9HCB6 807 aa11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 MBIPQ9NS73 344 aa11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-239ENST00000637297 PRAMEF22A3QJZ6 481 aa11.91□□□□□ -0.5
CACNA1A-239ENST00000637297 ZPR1O75312 459 aa11.91□□□□□ -0.5
CACNA1A-239ENST00000637297 A1BGP04217 495 aa11.91□□□□□ -0.5
CACNA1A-239ENST00000637297 MTFR1LQ9H019 292 aa11.91□□□□□ -0.5
CACNA1A-239ENST00000637297 ZBTB1Q9Y2K1 713 aa11.91□□□□□ -0.5
CACNA1A-239ENST00000637297 IL16Q14005 1332 aa11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 CASZ1Q86V15 1759 aa11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 A0A087WZG4 1122 aa11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 ZNF853P0CG23 659 aa11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 ARHGEF1Q92888 912 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 PPP1R1BQ9UD71 204 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-239ENST00000637297 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.51
CACNA1A-239ENST00000637297 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 POLD1P28340 1107 aa11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 IL6STP40189 918 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 TSR2Q969E8 191 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 CHMP4AQ9BY43 222 aa11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 MYH16Q9H6N6 1097 aa11.89□□□□□ -0.51
CACNA1A-239ENST00000637297 SOS1Q07889 1333 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-239ENST00000637297 PIP4K2AP48426 406 aaPredicted RBP11.88□□□□□ -0.51
CACNA1A-239ENST00000637297 DUSP27Q5VZP5 1158 aa11.88□□□□□ -0.51
CACNA1A-239ENST00000637297 MSL1Q68DK7 614 aa11.88□□□□□ -0.51
CACNA1A-239ENST00000637297 NECTIN2Q92692 538 aa11.88□□□□□ -0.51
CACNA1A-239ENST00000637297 COL15A1P39059 1388 aa11.88□□□□□ -0.51
CACNA1A-239ENST00000637297 HOXB7P09629 217 aa11.87□□□□□ -0.51
CACNA1A-239ENST00000637297 MYL6BP14649 208 aa11.87□□□□□ -0.51
CACNA1A-239ENST00000637297 EIF5P55010 431 aaKnown RBP11.87□□□□□ -0.51
CACNA1A-239ENST00000637297 KRT24Q2M2I5 525 aa11.87□□□□□ -0.51
CACNA1A-239ENST00000637297 HDGFL1Q5TGJ6 251 aa11.87□□□□□ -0.51
CACNA1A-239ENST00000637297 NLGN1Q8N2Q7 840 aa11.87□□□□□ -0.51
CACNA1A-239ENST00000637297 USPL1Q5W0Q7 1092 aa11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 DZIP3Q86Y13 1208 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 NARFQ9UHQ1 456 aa11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 TBC1D2BQ9UPU7 963 aa11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 C4AP0C0L4 1744 aa11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 USP42Q9H9J4 1324 aaKnown RBP11.86□□□□□ -0.51
CACNA1A-239ENST00000637297 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
CACNA1A-239ENST00000637297 SRP68Q9UHB9 627 aaKnown RBP11.85□□□□□ -0.51
CACNA1A-239ENST00000637297 FANCIQ9NVI1 1328 aa11.85□□□□□ -0.51
CACNA1A-239ENST00000637297 NBPF26B4DH59 902 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 E9PSI1 815 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 GYS1P13807 737 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 TWISTNBQ3B726 338 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 CCDC30Q5VVM6 783 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 NBPF10Q6P3W6 841 aaKnown RBP11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 KIF6Q6ZMV9 814 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 NBPF15Q8N660 670 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 DBF4Q9UBU7 674 aaPredicted RBP11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 ZNF521Q96K83 1311 aa11.84□□□□□ -0.51
CACNA1A-239ENST00000637297 CACNA1FO60840 1977 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 NEFLP07196 543 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 EXOSC9Q06265 439 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 AIMP1Q12904 312 aaKnown RBP11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 TSPYL6Q8N831 410 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 SPINK5Q9NQ38 1064 aaPredicted RBP11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 DDX21Q9NR30 783 aaKnown RBP eCLIP11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 CHPF2Q9P2E5 772 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 ZNF652Q9Y2D9 606 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 PARP3Q9Y6F1 533 aa11.83□□□□□ -0.52
CACNA1A-239ENST00000637297 LRP5O75197 1615 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 ANXA1P04083 346 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 MMP10P09238 476 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 PTGER2P43116 358 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 FKBP8Q14318 412 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 BICDL1Q6ZP65 573 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 HYPKQ9NX55 129 aa11.82□□□□□ -0.52
CACNA1A-239ENST00000637297 NPHP1O15259 732 aa11.81□□□□□ -0.52
CACNA1A-239ENST00000637297 SLFN5Q08AF3 891 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms