RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 GIGYF1O75420 1035 aaPredicted RBP10.68□□□□□ -0.7
PNKP-226ENST00000636840 IL6STP40189 918 aaPredicted RBP10.68□□□□□ -0.7
PNKP-226ENST00000636840 PDGFDQ9GZP0 370 aaPredicted RBP10.68□□□□□ -0.7
PNKP-226ENST00000636840 IFT57Q9NWB7 429 aa10.68□□□□□ -0.7
PNKP-226ENST00000636840 ZNF330Q9Y3S2 320 aaPredicted RBP10.68□□□□□ -0.7
PNKP-226ENST00000636840 SALL2Q9Y467 1007 aaPredicted RBP10.68□□□□□ -0.7
PNKP-226ENST00000636840 USP16Q9Y5T5 823 aa10.68□□□□□ -0.7
PNKP-226ENST00000636840 VIRMAQ69YN4 1812 aaKnown RBP10.68□□□□□ -0.7
PNKP-226ENST00000636840 DLG5Q8TDM6 1919 aa10.67□□□□□ -0.7
PNKP-226ENST00000636840 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
PNKP-226ENST00000636840 WWC1Q8IX03 1113 aa10.67□□□□□ -0.7
PNKP-226ENST00000636840 MIER1Q8N108 512 aa10.67□□□□□ -0.7
PNKP-226ENST00000636840 C4BP0C0L5 1744 aa10.67□□□□□ -0.7
PNKP-226ENST00000636840 C5P01031 1676 aa10.66□□□□□ -0.7
PNKP-226ENST00000636840 ZNF831Q5JPB2 1677 aa10.66□□□□□ -0.7
PNKP-226ENST00000636840 TAF1LQ8IZX4 1826 aa10.66□□□□□ -0.7
PNKP-226ENST00000636840 A1BGP04217 495 aa10.66□□□□□ -0.7
PNKP-226ENST00000636840 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
PNKP-226ENST00000636840 EIF5P55010 431 aaKnown RBP10.66□□□□□ -0.7
PNKP-226ENST00000636840 ZBTB1Q9Y2K1 713 aa10.66□□□□□ -0.7
PNKP-226ENST00000636840 PAPPAQ13219 1627 aa10.66□□□□□ -0.7
PNKP-226ENST00000636840 IL16Q14005 1332 aa10.65□□□□□ -0.7
PNKP-226ENST00000636840 MSL1Q68DK7 614 aa10.65□□□□□ -0.7
PNKP-226ENST00000636840 SMIM5Q71RC9 77 aa10.65□□□□□ -0.7
PNKP-226ENST00000636840 NARFQ9UHQ1 456 aa10.65□□□□□ -0.7
PNKP-226ENST00000636840 KCPQ6ZWJ8 1503 aa10.64□□□□□ -0.71
PNKP-226ENST00000636840 SOS1Q07889 1333 aaPredicted RBP10.64□□□□□ -0.71
PNKP-226ENST00000636840 HOXB7P09629 217 aa10.64□□□□□ -0.71
PNKP-226ENST00000636840 ZNF853P0CG23 659 aa10.64□□□□□ -0.71
PNKP-226ENST00000636840 PTGER2P43116 358 aa10.64□□□□□ -0.71
PNKP-226ENST00000636840 MBIPQ9NS73 344 aa10.64□□□□□ -0.71
PNKP-226ENST00000636840 PARP3Q9Y6F1 533 aa10.64□□□□□ -0.71
PNKP-226ENST00000636840 ERBB4Q15303 1308 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 SIPA1L3O60292 1781 aaPredicted RBP10.63□□□□□ -0.71
PNKP-226ENST00000636840 SENP3-EIF4A1A0A087X0R7 540 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 PRAMEF22A3QJZ6 481 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 GYS1P13807 737 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 USPL1Q5W0Q7 1092 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 AMIGO3Q86WK7 504 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 DZIP3Q86Y13 1208 aaKnown RBP10.63□□□□□ -0.71
PNKP-226ENST00000636840 KLHL34Q8N239 644 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 MYH16Q9H6N6 1097 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 TBC1D2BQ9UPU7 963 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 ZNF652Q9Y2D9 606 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 COL15A1P39059 1388 aa10.63□□□□□ -0.71
PNKP-226ENST00000636840 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
PNKP-226ENST00000636840 QSER1Q2KHR3 1735 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 MMP10P09238 476 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 MYL6BP14649 208 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 HDGFL1Q5TGJ6 251 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 CLEC4GQ6UXB4 293 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 SGIP1Q9BQI5 828 aa10.62□□□□□ -0.71
PNKP-226ENST00000636840 SRP68Q9UHB9 627 aaKnown RBP10.62□□□□□ -0.71
PNKP-226ENST00000636840 MYH14Q7Z406 1995 aaKnown RBP10.61□□□□□ -0.71
PNKP-226ENST00000636840 ELL2O00472 640 aaPredicted RBP10.61□□□□□ -0.71
PNKP-226ENST00000636840 NPHP1O15259 732 aa10.61□□□□□ -0.71
PNKP-226ENST00000636840 CCDC30Q5VVM6 783 aa10.61□□□□□ -0.71
PNKP-226ENST00000636840 KIF6Q6ZMV9 814 aa10.61□□□□□ -0.71
PNKP-226ENST00000636840 DBF4Q9UBU7 674 aaPredicted RBP10.61□□□□□ -0.71
PNKP-226ENST00000636840 UBR3Q6ZT12 1888 aa10.61□□□□□ -0.71
PNKP-226ENST00000636840 UBR2Q8IWV8 1755 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 NBPF26B4DH59 902 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 RGL2O15211 777 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 PIP4K2AP48426 406 aaPredicted RBP10.6□□□□□ -0.71
PNKP-226ENST00000636840 FKBP8Q14318 412 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
PNKP-226ENST00000636840 NBPF15Q8N660 670 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 NECTIN2Q92692 538 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 SETDB2Q96T68 719 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 SYT17Q9BSW7 474 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 FHDC1Q9C0D6 1143 aaPredicted RBP10.6□□□□□ -0.71
PNKP-226ENST00000636840 DDX21Q9NR30 783 aaKnown RBP eCLIP10.6□□□□□ -0.71
PNKP-226ENST00000636840 HYPKQ9NX55 129 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 CD2APQ9Y5K6 639 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 CASZ1Q86V15 1759 aa10.6□□□□□ -0.71
PNKP-226ENST00000636840 COL5A3P25940 1745 aaPredicted RBP10.59□□□□□ -0.71
PNKP-226ENST00000636840 ERVV-1B6SEH8 477 aa10.59□□□□□ -0.71
PNKP-226ENST00000636840 TM4SF1P30408 202 aa10.59□□□□□ -0.71
PNKP-226ENST00000636840 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
PNKP-226ENST00000636840 STK31Q9BXU1 1019 aa10.59□□□□□ -0.71
PNKP-226ENST00000636840 CICQ96RK0 1608 aaPredicted RBP10.58□□□□□ -0.72
PNKP-226ENST00000636840 TJP1Q07157 1748 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 E9PSI1 815 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 CAMTA2O94983 1202 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 SERPINB2P05120 415 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 AIMP1Q12904 312 aaKnown RBP10.58□□□□□ -0.72
PNKP-226ENST00000636840 KRT24Q2M2I5 525 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
PNKP-226ENST00000636840 C8orf58Q8NAV2 365 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 TSR2Q969E8 191 aaKnown RBP10.58□□□□□ -0.72
PNKP-226ENST00000636840 LRP5O75197 1615 aa10.58□□□□□ -0.72
PNKP-226ENST00000636840 DDX58O95786 925 aaKnown RBP10.57□□□□□ -0.72
PNKP-226ENST00000636840 GTF2E1P29083 439 aaPredicted RBP10.57□□□□□ -0.72
PNKP-226ENST00000636840 TGFB2P61812 414 aa10.57□□□□□ -0.72
PNKP-226ENST00000636840 NFIXQ14938 502 aa10.57□□□□□ -0.72
PNKP-226ENST00000636840 HSP90AB3PQ58FF7 597 aa10.57□□□□□ -0.72
PNKP-226ENST00000636840 TPTE2Q6XPS3 522 aa10.57□□□□□ -0.72
PNKP-226ENST00000636840 COPS6Q7L5N1 327 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms