RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 PRAMEF22A3QJZ6 481 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 GNPATO15228 680 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 GIGYF1O75420 1035 aaPredicted RBP6.91□□□□□ -1.3
CHD2-224ENST00000636410 STARD3NLO95772 234 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 HOXB7P09629 217 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 GOLGA2Q08379 1002 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 RC3H1Q5TC82 1133 aaKnown RBP6.91□□□□□ -1.3
CHD2-224ENST00000636410 TSR2Q969E8 191 aaKnown RBP6.91□□□□□ -1.3
CHD2-224ENST00000636410 MYH16Q9H6N6 1097 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 CCDC87Q9NVE4 849 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 ZBED9Q6R2W3 1325 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 PNPLA7Q6ZV29 1317 aa6.91□□□□□ -1.3
CHD2-224ENST00000636410 LRP5O75197 1615 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 ANKRD36CQ5JPF3 1778 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 E9PSI1 815 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 SSFA2P28290 1259 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 R3HDM1Q15032 1099 aaKnown RBP6.9□□□□□ -1.3
CHD2-224ENST00000636410 KRT24Q2M2I5 525 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 SPINK5Q9NQ38 1064 aaPredicted RBP6.9□□□□□ -1.3
CHD2-224ENST00000636410 TFCP2L1Q9NZI6 479 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 ZBTB1Q9Y2K1 713 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 USP16Q9Y5T5 823 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 SOS1Q07889 1333 aaPredicted RBP6.9□□□□□ -1.3
CHD2-224ENST00000636410 ERBB4Q15303 1308 aa6.9□□□□□ -1.3
CHD2-224ENST00000636410 COL15A1P39059 1388 aa6.9□□□□□ -1.31
CHD2-224ENST00000636410 ARFGEF2Q9Y6D5 1785 aa6.9□□□□□ -1.31
CHD2-224ENST00000636410 CACNA1FO60840 1977 aa6.89□□□□□ -1.31
CHD2-224ENST00000636410 PSDA5PKW4 1024 aaPredicted RBP6.89□□□□□ -1.31
CHD2-224ENST00000636410 RPS6KA4O75676 772 aa6.89□□□□□ -1.31
CHD2-224ENST00000636410 PHF14O94880 888 aa6.89□□□□□ -1.31
CHD2-224ENST00000636410 ADRA2BP18089 450 aa6.89□□□□□ -1.31
CHD2-224ENST00000636410 SLFN5Q08AF3 891 aa6.89□□□□□ -1.31
CHD2-224ENST00000636410 INTS5Q6P9B9 1019 aaKnown RBP6.89□□□□□ -1.31
CHD2-224ENST00000636410 FLAD1Q8NFF5 587 aa6.89□□□□□ -1.31
CHD2-224ENST00000636410 RTCBQ9Y3I0 505 aaKnown RBP6.89□□□□□ -1.31
CHD2-224ENST00000636410 NUP98P52948 1817 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
CHD2-224ENST00000636410 A1BGP04217 495 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 CANXP27824 592 aaKnown RBP6.88□□□□□ -1.31
CHD2-224ENST00000636410 IL6STP40189 918 aaPredicted RBP6.88□□□□□ -1.31
CHD2-224ENST00000636410 EXOSC9Q06265 439 aaKnown RBP6.88□□□□□ -1.31
CHD2-224ENST00000636410 TWISTNBQ3B726 338 aaPredicted RBP6.88□□□□□ -1.31
CHD2-224ENST00000636410 HDGFL1Q5TGJ6 251 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 AMIGO3Q86WK7 504 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 C8orf58Q8NAV2 365 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 CHMP4AQ9BY43 222 aa6.88□□□□□ -1.31
CHD2-224ENST00000636410 USP42Q9H9J4 1324 aaKnown RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 A0A087WZG4 1122 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 NBPF26B4DH59 902 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 MSH5O43196 834 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 EIF2S2P20042 333 aaKnown RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 PIP4K2AP48426 406 aaPredicted RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 EIF5P55010 431 aaKnown RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 COL23A1Q86Y22 540 aaPredicted RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 TRMT2AQ8IZ69 625 aaKnown RBP6.87□□□□□ -1.31
CHD2-224ENST00000636410 NBPF15Q8N660 670 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 TSPYL6Q8N831 410 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 SLC16A10Q8TF71 515 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 CDCA7LQ96GN5 454 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 NRXN2Q9P2S2 1712 aa6.87□□□□□ -1.31
CHD2-224ENST00000636410 AFDNP55196 1824 aaKnown RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 MYL6BP14649 208 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 RFC4P35249 363 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 PDIA6Q15084 440 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 CCDC30Q5VVM6 783 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 SMIM5Q71RC9 77 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 NECTIN2Q92692 538 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 ARHGEF1Q92888 912 aaKnown RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 PDGFDQ9GZP0 370 aaPredicted RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 MTFR1LQ9H019 292 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 DDX21Q9NR30 783 aaKnown RBP eCLIP6.86□□□□□ -1.31
CHD2-224ENST00000636410 CHPF2Q9P2E5 772 aa6.86□□□□□ -1.31
CHD2-224ENST00000636410 DBF4Q9UBU7 674 aaPredicted RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 ZNF330Q9Y3S2 320 aaPredicted RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 N4BP2Q86UW6 1770 aaPredicted RBP6.86□□□□□ -1.31
CHD2-224ENST00000636410 KIF13BQ9NQT8 1826 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 RGL2O15211 777 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 ZPR1O75312 459 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 VAMP4O75379 141 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 PROSER3Q2NL68 480 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 USPL1Q5W0Q7 1092 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 LRP10Q7Z4F1 713 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 DZIP3Q86Y13 1208 aaKnown RBP6.85□□□□□ -1.31
CHD2-224ENST00000636410 STK31Q9BXU1 1019 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 SRP68Q9UHB9 627 aaKnown RBP6.85□□□□□ -1.31
CHD2-224ENST00000636410 NARFQ9UHQ1 456 aa6.85□□□□□ -1.31
CHD2-224ENST00000636410 ZBTB7AO95365 584 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 ANXA1P04083 346 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 CT47B1P0C2W7 299 aaPredicted RBP6.84□□□□□ -1.31
CHD2-224ENST00000636410 GYS1P13807 737 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 KIF6Q6ZMV9 814 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 ZNF428Q96B54 188 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 YTHDC1Q96MU7 727 aaKnown RBP6.84□□□□□ -1.31
CHD2-224ENST00000636410 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
CHD2-224ENST00000636410 TBC1D2BQ9UPU7 963 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms