RNA–Protein interactions for RNA: ENST00000636048.1

ARHGEF9-222, Transcript of Cdc42 guanine nucleotide exchange factor 9, human

TSL 5 BASIC

Gene ARHGEF9, Length 5,059 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF9-222	ENST00000636048	EPS15	P42566	896 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	DMTN	Q08495	405 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	SNW1	Q13573	536 aa	Known RBP	10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ANO6	Q4KMQ2	910 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CDK19	Q9BWU1	502 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	MBIP	Q9NS73	344 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CCDC171	Q6TFL3	1326 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CCDC102A	Q96A19	550 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ANO10	Q9NW15	660 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CDR1	P51861	262 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	FBXO3	Q9UK99	471 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	VGLL3	A8MV65	326 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	SKIL	P12757	684 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	RRS1	Q15050	365 aa	Known RBP	10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	TRMT2A	Q8IZ69	625 aa	Known RBP	10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ZNF397	Q8NF99	534 aa	Predicted RBP	10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ESYT1	Q9BSJ8	1104 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	SPG7	Q9UQ90	795 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ZNF521	Q96K83	1311 aa		10.67	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	RAB11FIP3	O75154	756 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	PDE1A	P54750	535 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	PKP1	Q13835	747 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ZFYVE27	Q5T4F4	411 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	MIS18A	Q9NYP9	233 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	KDM6B	O15054	1643 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	DNM1	Q05193	864 aa	Known RBP	10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	MCM10	Q7L590	875 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ANKRD44	Q8N8A2	993 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	KDM5C	P41229	1560 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ATAD2	Q6PL18	1390 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	F13A1	P00488	732 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ANAPC15	P60006	121 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CFAP100	Q494V2	611 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	HDGFL1	Q5TGJ6	251 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	MRPL50	Q8N5N7	158 aa	Known RBP	10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	DCTPP1	Q9H773	170 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	UNC13A	Q9UPW8	1703 aa		10.66	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	POGZ	Q7Z3K3	1410 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CBFA2T2	O43439	604 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	DNMT1	P26358	1616 aa	Known RBP	10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	TOM1L2	Q6ZVM7	507 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ANKLE2	Q86XL3	938 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	INTS4	Q96HW7	963 aa	Known RBP	10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	MEIS3	Q99687	375 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CD2BP2	O95400	341 aa	Known RBP	10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	GSDMD	P57764	484 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	NUTM2G	Q5VZR2	741 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ERC1	Q8IUD2	1116 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	CAGE1	Q8TC20	777 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	GPT2	Q8TD30	523 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ZFP91	Q96JP5	570 aa	Predicted RBP	10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	FAM135A	Q9P2D6	1515 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	ZBTB7B	O15156	539 aa	Predicted RBP	10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	SLU7	O95391	586 aa	Known RBP	10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	DACT1	Q9NYF0	836 aa		10.65	□□□□□ -0.7
ARHGEF9-222	ENST00000636048	LMAN1	P49257	510 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TYRO3	Q06418	890 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	GABPB1	Q06547	395 aa	Predicted RBP	10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	BRPF1	P55201	1214 aa	Predicted RBP	10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	NSD2	O96028	1365 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	GADD45B	O75293	160 aa	Predicted RBP	10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	UTP14C	Q5TAP6	766 aa	Known RBP	10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	AACS	Q86V21	672 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	LUZP1	Q86V48	1076 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	KIF1BP	Q96EK5	621 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	CHAMP1	Q96JM3	812 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	DNAJC25	Q9H1X3	360 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	GLRX3	O76003	335 aa	Known RBP	10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TMC6	Q7Z403	805 aa		10.64	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	STX1A	Q16623	288 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	NPC1L1	Q9UHC9	1359 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	FAM83G	A6ND36	823 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	CTAGE5	O15320	804 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	ZSCAN12	O43309	604 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	PIP4K2B	P78356	416 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TXLNB	Q8N3L3	684 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	OTUD7A	Q8TE49	926 aa	Predicted RBP	10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	CDK5RAP3	Q96JB5	506 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	PRDM11	Q9NQV5	511 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TMOD2	Q9NZR1	351 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	EIF2AK4	Q9P2K8	1649 aa	Known RBP	10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	PATL2	C9JE40	543 aa	Known RBP	10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	CAVIN2	O95810	425 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TSPYL6	Q8N831	410 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	CNNM1	Q9NRU3	951 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	LRRFIP2	Q9Y608	721 aa	Known RBP	10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	NECAB1	Q8N987	351 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	MTMR7	Q9Y216	660 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	EMILIN1	Q9Y6C2	1016 aa		10.63	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	NAP1L1	P55209	391 aa	Known RBP	10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	SIL1	Q9H173	461 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	PTPRC	P08575	1304 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	VAMP4	O75379	141 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TXLNA	P40222	546 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	PPFIBP1	Q86W92	1011 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	SMARCE1	Q969G3	411 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	TMX1	Q9H3N1	280 aa		10.62	□□□□□ -0.71
ARHGEF9-222	ENST00000636048	CASQ1	P31415	396 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms